Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.12□□□□□ -0.31
GDNFP39905 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.12□□□□□ -0.31
GDNFP39905 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.11□□□□□ -0.31
GDNFP39905 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
GDNFP39905 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.11□□□□□ -0.31
GDNFP39905 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
GDNFP39905 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.11□□□□□ -0.31
GDNFP39905 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.11□□□□□ -0.31
GDNFP39905 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
GDNFP39905 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
GDNFP39905 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.11□□□□□ -0.31
GDNFP39905 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.11□□□□□ -0.31
GDNFP39905 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.11□□□□□ -0.31
GDNFP39905 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
GDNFP39905 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.11□□□□□ -0.31
GDNFP39905 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.11□□□□□ -0.31
GDNFP39905 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.11□□□□□ -0.31
GDNFP39905 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.11□□□□□ -0.31
GDNFP39905 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.11□□□□□ -0.31
GDNFP39905 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.11□□□□□ -0.31
GDNFP39905 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.11□□□□□ -0.31
GDNFP39905 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.11□□□□□ -0.31
GDNFP39905 AC004449.1-201ENST00000564240 433 ntBASIC13.11□□□□□ -0.31
GDNFP39905 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.11□□□□□ -0.31
GDNFP39905 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
GDNFP39905 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.11□□□□□ -0.31
GDNFP39905 AC006538.3-201ENST00000612495 578 ntBASIC13.11□□□□□ -0.31
GDNFP39905 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.11□□□□□ -0.31
GDNFP39905 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.11□□□□□ -0.31
GDNFP39905 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GDNFP39905 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.1□□□□□ -0.31
GDNFP39905 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
GDNFP39905 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.1□□□□□ -0.31
GDNFP39905 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.1□□□□□ -0.31
GDNFP39905 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GDNFP39905 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GDNFP39905 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GDNFP39905 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GDNFP39905 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
GDNFP39905 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.1□□□□□ -0.31
GDNFP39905 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GDNFP39905 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
GDNFP39905 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.1□□□□□ -0.31
GDNFP39905 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.1□□□□□ -0.31
GDNFP39905 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.1□□□□□ -0.31
GDNFP39905 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
GDNFP39905 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GDNFP39905 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GDNFP39905 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GDNFP39905 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
GDNFP39905 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
GDNFP39905 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
GDNFP39905 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.1□□□□□ -0.31
GDNFP39905 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.1□□□□□ -0.31
GDNFP39905 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.1□□□□□ -0.31
GDNFP39905 HIST3H2BA-201ENST00000436555 524 ntBASIC13.1□□□□□ -0.31
GDNFP39905 METTL21AP1-201ENST00000438852 635 ntBASIC13.1□□□□□ -0.31
GDNFP39905 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.1□□□□□ -0.31
GDNFP39905 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GDNFP39905 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.1□□□□□ -0.31
GDNFP39905 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.1□□□□□ -0.31
GDNFP39905 AC022447.6-201ENST00000515522 438 ntBASIC13.1□□□□□ -0.31
GDNFP39905 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.1□□□□□ -0.31
GDNFP39905 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.1□□□□□ -0.31
GDNFP39905 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.1□□□□□ -0.31
GDNFP39905 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
GDNFP39905 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GDNFP39905 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
GDNFP39905 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GDNFP39905 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GDNFP39905 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
GDNFP39905 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
GDNFP39905 KRT8P22-201ENST00000562317 1415 ntBASIC13.1□□□□□ -0.31
GDNFP39905 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms