Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT9P35527 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT9P35527 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
KRT9P35527 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
KRT9P35527 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.43■□□□□ 0.22
KRT9P35527 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.43■□□□□ 0.22
KRT9P35527 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT9P35527 GNAQP1-201ENST00000444815 1067 ntBASIC16.43■□□□□ 0.22
KRT9P35527 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.43■□□□□ 0.22
KRT9P35527 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT9P35527 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT9P35527 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.43■□□□□ 0.22
KRT9P35527 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.43■□□□□ 0.22
KRT9P35527 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.43■□□□□ 0.22
KRT9P35527 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT9P35527 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.43■□□□□ 0.22
KRT9P35527 AC009118.2-201ENST00000613275 655 ntBASIC16.43■□□□□ 0.22
KRT9P35527 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT9P35527 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.43■□□□□ 0.22
KRT9P35527 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
KRT9P35527 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT9P35527 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT9P35527 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT9P35527 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT9P35527 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT9P35527 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT9P35527 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT9P35527 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT9P35527 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT9P35527 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
KRT9P35527 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT9P35527 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT9P35527 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT9P35527 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.43■□□□□ 0.22
KRT9P35527 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
KRT9P35527 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT9P35527 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT9P35527 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC16.42■□□□□ 0.22
KRT9P35527 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT9P35527 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT9P35527 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT9P35527 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT9P35527 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT9P35527 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT9P35527 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT9P35527 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT9P35527 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT9P35527 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT9P35527 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT9P35527 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT9P35527 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
KRT9P35527 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT9P35527 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT9P35527 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT9P35527 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT9P35527 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT9P35527 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
KRT9P35527 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT9P35527 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT9P35527 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.42■□□□□ 0.22
KRT9P35527 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT9P35527 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.42■□□□□ 0.22
KRT9P35527 HLA-K-203ENST00000430151 1046 ntBASIC16.42■□□□□ 0.22
KRT9P35527 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
KRT9P35527 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.42■□□□□ 0.22
KRT9P35527 UGT1A2P-201ENST00000454886 866 ntBASIC16.42■□□□□ 0.22
KRT9P35527 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
KRT9P35527 RN7SL399P-201ENST00000471648 279 ntBASIC16.42■□□□□ 0.22
KRT9P35527 FAM86LP-201ENST00000478302 853 ntBASIC16.42■□□□□ 0.22
KRT9P35527 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.42■□□□□ 0.22
KRT9P35527 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.42■□□□□ 0.22
KRT9P35527 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
KRT9P35527 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
KRT9P35527 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.42■□□□□ 0.22
KRT9P35527 AC004790.1-201ENST00000612686 536 ntBASIC16.42■□□□□ 0.22
KRT9P35527 AJ011932.1-201ENST00000621707 465 ntBASIC16.42■□□□□ 0.22
KRT9P35527 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
KRT9P35527 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT9P35527 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT9P35527 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
KRT9P35527 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.42■□□□□ 0.22
KRT9P35527 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
KRT9P35527 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT9P35527 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT9P35527 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT9P35527 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
KRT9P35527 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
KRT9P35527 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT9P35527 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT9P35527 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT9P35527 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT9P35527 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT9P35527 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT9P35527 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
KRT9P35527 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT9P35527 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.42■□□□□ 0.22
KRT9P35527 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
KRT9P35527 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT9P35527 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT9P35527 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms