Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 IGHV3-65-201ENST00000523210 341 ntBASIC13.34□□□□□ -0.27
CD40LGP29965 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CD40LGP29965 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.34□□□□□ -0.27
CD40LGP29965 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.34□□□□□ -0.27
CD40LGP29965 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.34□□□□□ -0.27
CD40LGP29965 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CD40LGP29965 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.34□□□□□ -0.27
CD40LGP29965 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.34□□□□□ -0.27
CD40LGP29965 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.34□□□□□ -0.27
CD40LGP29965 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD40LGP29965 KHSRPP1-201ENST00000427983 1768 ntBASIC13.34□□□□□ -0.27
CD40LGP29965 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CD40LGP29965 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD40LGP29965 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CD40LGP29965 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.34□□□□□ -0.27
CD40LGP29965 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CD40LGP29965 AP002414.3-201ENST00000589352 1468 ntBASIC13.34□□□□□ -0.27
CD40LGP29965 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD40LGP29965 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD40LGP29965 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.34□□□□□ -0.27
CD40LGP29965 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.34□□□□□ -0.27
CD40LGP29965 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.34□□□□□ -0.27
CD40LGP29965 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD40LGP29965 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD40LGP29965 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.34□□□□□ -0.27
CD40LGP29965 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CD40LGP29965 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD40LGP29965 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CD40LGP29965 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CD40LGP29965 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
CD40LGP29965 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CD40LGP29965 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CD40LGP29965 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40LGP29965 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40LGP29965 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40LGP29965 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.33□□□□□ -0.28
CD40LGP29965 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40LGP29965 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40LGP29965 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CD40LGP29965 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CD40LGP29965 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.33□□□□□ -0.28
CD40LGP29965 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40LGP29965 HMGA1P7-201ENST00000406908 502 ntBASIC13.33□□□□□ -0.28
CD40LGP29965 AL590627.1-203ENST00000421194 1026 ntBASIC13.33□□□□□ -0.28
CD40LGP29965 AC098831.1-202ENST00000438821 336 ntBASIC13.33□□□□□ -0.28
CD40LGP29965 PRSS29P-201ENST00000440800 595 ntBASIC13.33□□□□□ -0.28
CD40LGP29965 AC108751.1-201ENST00000490852 363 ntBASIC13.33□□□□□ -0.28
CD40LGP29965 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.33□□□□□ -0.28
CD40LGP29965 HNRNPUP1-201ENST00000554987 333 ntBASIC13.33□□□□□ -0.28
CD40LGP29965 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.33□□□□□ -0.28
CD40LGP29965 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.33□□□□□ -0.28
CD40LGP29965 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CD40LGP29965 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40LGP29965 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40LGP29965 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CD40LGP29965 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.33□□□□□ -0.28
CD40LGP29965 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.33□□□□□ -0.28
CD40LGP29965 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40LGP29965 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD40LGP29965 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40LGP29965 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD40LGP29965 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD40LGP29965 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CD40LGP29965 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.33□□□□□ -0.28
CD40LGP29965 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.33□□□□□ -0.28
CD40LGP29965 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CD40LGP29965 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40LGP29965 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD40LGP29965 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40LGP29965 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD40LGP29965 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40LGP29965 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40LGP29965 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD40LGP29965 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40LGP29965 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40LGP29965 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CD40LGP29965 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40LGP29965 CICP1-201ENST00000416803 2410 ntBASIC13.32□□□□□ -0.28
CD40LGP29965 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CD40LGP29965 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CD40LGP29965 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40LGP29965 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40LGP29965 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13.32□□□□□ -0.28
CD40LGP29965 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40LGP29965 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD40LGP29965 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40LGP29965 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CD40LGP29965 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40LGP29965 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40LGP29965 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40LGP29965 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40LGP29965 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40LGP29965 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CD40LGP29965 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.32□□□□□ -0.28
CD40LGP29965 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.32□□□□□ -0.28
CD40LGP29965 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40LGP29965 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CD40LGP29965 FDX1P1-201ENST00000449115 551 ntBASIC13.32□□□□□ -0.28
CD40LGP29965 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.32□□□□□ -0.28
CD40LGP29965 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms