Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APEX1P27695 AC018529.2-202ENST00000611482 3087 ntBASIC13.62□□□□□ -0.23
APEX1P27695 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.62□□□□□ -0.23
APEX1P27695 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.62□□□□□ -0.23
APEX1P27695 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
APEX1P27695 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.62□□□□□ -0.23
APEX1P27695 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.62□□□□□ -0.23
APEX1P27695 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APEX1P27695 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APEX1P27695 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
APEX1P27695 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APEX1P27695 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APEX1P27695 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APEX1P27695 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APEX1P27695 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
APEX1P27695 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APEX1P27695 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APEX1P27695 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APEX1P27695 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.62□□□□□ -0.23
APEX1P27695 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
APEX1P27695 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.62□□□□□ -0.23
APEX1P27695 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.62□□□□□ -0.23
APEX1P27695 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
APEX1P27695 AC027612.1-201ENST00000445234 2395 ntBASIC13.62□□□□□ -0.23
APEX1P27695 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APEX1P27695 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APEX1P27695 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
APEX1P27695 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.62□□□□□ -0.23
APEX1P27695 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.62□□□□□ -0.23
APEX1P27695 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APEX1P27695 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APEX1P27695 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APEX1P27695 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
APEX1P27695 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APEX1P27695 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APEX1P27695 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APEX1P27695 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APEX1P27695 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
APEX1P27695 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APEX1P27695 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
APEX1P27695 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APEX1P27695 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APEX1P27695 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
APEX1P27695 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
APEX1P27695 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APEX1P27695 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.61□□□□□ -0.23
APEX1P27695 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APEX1P27695 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APEX1P27695 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.61□□□□□ -0.23
APEX1P27695 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APEX1P27695 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APEX1P27695 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
APEX1P27695 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
APEX1P27695 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
APEX1P27695 AC011474.4-201ENST00000623523 2076 ntBASIC13.61□□□□□ -0.23
APEX1P27695 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.61□□□□□ -0.23
APEX1P27695 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.61□□□□□ -0.23
APEX1P27695 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APEX1P27695 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APEX1P27695 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APEX1P27695 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.61□□□□□ -0.23
APEX1P27695 GAPDHP21-201ENST00000450301 1010 ntBASIC13.61□□□□□ -0.23
APEX1P27695 MEIS3P1-201ENST00000495167 958 ntBASIC13.61□□□□□ -0.23
APEX1P27695 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APEX1P27695 DOC2GP-202ENST00000514950 1163 ntBASIC13.61□□□□□ -0.23
APEX1P27695 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
APEX1P27695 AP005018.1-201ENST00000525475 301 ntBASIC13.61□□□□□ -0.23
APEX1P27695 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.61□□□□□ -0.23
APEX1P27695 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.61□□□□□ -0.23
APEX1P27695 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.61□□□□□ -0.23
APEX1P27695 AC004790.1-201ENST00000612686 536 ntBASIC13.61□□□□□ -0.23
APEX1P27695 AL662799.1-202ENST00000614205 422 ntBASIC13.61□□□□□ -0.23
APEX1P27695 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.61□□□□□ -0.23
APEX1P27695 TCAF1P1-201ENST00000414990 2232 ntBASIC13.61□□□□□ -0.23
APEX1P27695 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APEX1P27695 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.61□□□□□ -0.23
APEX1P27695 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APEX1P27695 AC005562.1-201ENST00000583030 3219 ntBASIC13.61□□□□□ -0.23
APEX1P27695 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.61□□□□□ -0.23
APEX1P27695 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APEX1P27695 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
APEX1P27695 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
APEX1P27695 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.61□□□□□ -0.23
APEX1P27695 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
APEX1P27695 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.61□□□□□ -0.23
APEX1P27695 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
APEX1P27695 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
APEX1P27695 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.61□□□□□ -0.23
APEX1P27695 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
APEX1P27695 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.61□□□□□ -0.23
APEX1P27695 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
APEX1P27695 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
APEX1P27695 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APEX1P27695 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
APEX1P27695 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
APEX1P27695 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APEX1P27695 AL121723.1-201ENST00000445194 1519 ntBASIC13.6□□□□□ -0.23
APEX1P27695 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
APEX1P27695 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APEX1P27695 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms