Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHMLP26374 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMLP26374 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHMLP26374 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHMLP26374 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHMLP26374 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC17.97■□□□□ 0.47
CHMLP26374 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMLP26374 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMLP26374 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMLP26374 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMLP26374 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMLP26374 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
CHMLP26374 AL928921.2-201ENST00000641325 2442 ntBASIC17.97■□□□□ 0.47
CHMLP26374 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMLP26374 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.97■□□□□ 0.47
CHMLP26374 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMLP26374 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.97■□□□□ 0.47
CHMLP26374 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.97■□□□□ 0.47
CHMLP26374 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.97■□□□□ 0.47
CHMLP26374 AC233724.13-201ENST00000598383 410 ntBASIC17.97■□□□□ 0.47
CHMLP26374 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.97■□□□□ 0.47
CHMLP26374 AC244669.2-201ENST00000612320 853 ntBASIC17.97■□□□□ 0.47
CHMLP26374 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CHMLP26374 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMLP26374 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CHMLP26374 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CHMLP26374 AC215219.1-201ENST00000400706 1817 ntBASIC17.97■□□□□ 0.47
CHMLP26374 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHMLP26374 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHMLP26374 AC015688.4-201ENST00000580780 1647 ntBASIC17.97■□□□□ 0.47
CHMLP26374 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMLP26374 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMLP26374 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHMLP26374 AC006504.5-208ENST00000588784 2401 ntBASIC17.97■□□□□ 0.47
CHMLP26374 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHMLP26374 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMLP26374 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.96■□□□□ 0.47
CHMLP26374 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CHMLP26374 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMLP26374 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMLP26374 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMLP26374 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMLP26374 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMLP26374 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.96■□□□□ 0.47
CHMLP26374 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.96■□□□□ 0.47
CHMLP26374 AC090505.1-201ENST00000430515 1834 ntBASIC17.96■□□□□ 0.47
CHMLP26374 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMLP26374 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMLP26374 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CHMLP26374 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
CHMLP26374 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC17.96■□□□□ 0.47
CHMLP26374 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMLP26374 TPM3P8-201ENST00000330554 643 ntBASIC17.96■□□□□ 0.47
CHMLP26374 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.96■□□□□ 0.47
CHMLP26374 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMLP26374 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMLP26374 COX5BP8-201ENST00000416911 349 ntBASIC17.96■□□□□ 0.47
CHMLP26374 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.96■□□□□ 0.47
CHMLP26374 TTTY23B-201ENST00000442790 549 ntBASIC17.96■□□□□ 0.47
CHMLP26374 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.96■□□□□ 0.47
CHMLP26374 FTH1P14-201ENST00000482930 551 ntBASIC17.96■□□□□ 0.47
CHMLP26374 RNA5SP486-201ENST00000515961 83 ntBASIC17.96■□□□□ 0.47
CHMLP26374 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CHMLP26374 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.96■□□□□ 0.47
CHMLP26374 BTNL10-201ENST00000595971 695 ntBASIC17.96■□□□□ 0.47
CHMLP26374 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CHMLP26374 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMLP26374 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
CHMLP26374 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMLP26374 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMLP26374 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.96■□□□□ 0.47
CHMLP26374 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CHMLP26374 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHMLP26374 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.96■□□□□ 0.47
CHMLP26374 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHMLP26374 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
CHMLP26374 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHMLP26374 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CHMLP26374 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMLP26374 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMLP26374 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMLP26374 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CHMLP26374 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.95■□□□□ 0.46
CHMLP26374 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHMLP26374 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
CHMLP26374 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMLP26374 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMLP26374 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMLP26374 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMLP26374 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.95■□□□□ 0.46
CHMLP26374 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CHMLP26374 RN7SL832P-201ENST00000607781 1756 ntBASIC17.95■□□□□ 0.46
CHMLP26374 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMLP26374 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHMLP26374 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
CHMLP26374 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMLP26374 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHMLP26374 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMLP26374 FAM197Y7-201ENST00000432892 766 ntBASIC17.95■□□□□ 0.46
CHMLP26374 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms