Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.26■□□□□ 0.03
PTPN3P26045 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.26■□□□□ 0.03
PTPN3P26045 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN3P26045 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN3P26045 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN3P26045 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN3P26045 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN3P26045 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN3P26045 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PTPN3P26045 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN3P26045 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN3P26045 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN3P26045 AL161772.1-201ENST00000610494 4412 ntBASIC15.26■□□□□ 0.03
PTPN3P26045 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
PTPN3P26045 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTPN3P26045 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.26■□□□□ 0.03
PTPN3P26045 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
PTPN3P26045 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PTPN3P26045 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN3P26045 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.25■□□□□ 0.03
PTPN3P26045 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN3P26045 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN3P26045 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.25■□□□□ 0.03
PTPN3P26045 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.25■□□□□ 0.03
PTPN3P26045 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PTPN3P26045 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PTPN3P26045 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.25■□□□□ 0.03
PTPN3P26045 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN3P26045 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN3P26045 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
PTPN3P26045 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN3P26045 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN3P26045 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
PTPN3P26045 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN3P26045 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN3P26045 TMEM14DP-201ENST00000422205 345 ntBASIC15.25■□□□□ 0.03
PTPN3P26045 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN3P26045 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.25■□□□□ 0.03
PTPN3P26045 AL355864.2-201ENST00000447420 863 ntBASIC15.25■□□□□ 0.03
PTPN3P26045 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PTPN3P26045 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.25■□□□□ 0.03
PTPN3P26045 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN3P26045 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PTPN3P26045 AC131206.1-201ENST00000538078 1211 ntBASIC15.25■□□□□ 0.03
PTPN3P26045 AC132938.2-201ENST00000579188 680 ntBASIC15.25■□□□□ 0.03
PTPN3P26045 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.25■□□□□ 0.03
PTPN3P26045 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.25■□□□□ 0.03
PTPN3P26045 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PTPN3P26045 AC138696.2-201ENST00000607376 223 ntBASIC15.25■□□□□ 0.03
PTPN3P26045 AL591163.1-201ENST00000641757 987 ntBASIC15.25■□□□□ 0.03
PTPN3P26045 AC011840.2-201ENST00000563063 1520 ntBASIC15.25■□□□□ 0.03
PTPN3P26045 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.25■□□□□ 0.03
PTPN3P26045 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN3P26045 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN3P26045 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN3P26045 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN3P26045 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PTPN3P26045 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN3P26045 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN3P26045 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.25■□□□□ 0.03
PTPN3P26045 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN3P26045 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN3P26045 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PTPN3P26045 AGGF1P1-201ENST00000509500 2073 ntBASIC15.24■□□□□ 0.03
PTPN3P26045 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PTPN3P26045 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PTPN3P26045 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PTPN3P26045 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 AC005229.1-201ENST00000392885 409 ntBASIC15.24■□□□□ 0.03
PTPN3P26045 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 AL512384.1-201ENST00000406683 331 ntBASIC15.24■□□□□ 0.03
PTPN3P26045 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.24■□□□□ 0.03
PTPN3P26045 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PTPN3P26045 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PTPN3P26045 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.24■□□□□ 0.03
PTPN3P26045 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.24■□□□□ 0.03
PTPN3P26045 SLC25A47P1-201ENST00000531577 414 ntBASIC15.24■□□□□ 0.03
PTPN3P26045 AC015936.2-201ENST00000593177 259 ntBASIC15.24■□□□□ 0.03
PTPN3P26045 AC008735.3-201ENST00000596646 500 ntBASIC15.24■□□□□ 0.03
PTPN3P26045 AC138466.3-201ENST00000619983 221 ntBASIC15.24■□□□□ 0.03
PTPN3P26045 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 INE2-201ENST00000630399 1874 ntBASIC15.24■□□□□ 0.03
PTPN3P26045 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN3P26045 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms