Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
MSR1P21757 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
MSR1P21757 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.27□□□□□ -0.28
MSR1P21757 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
MSR1P21757 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
MSR1P21757 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
MSR1P21757 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
MSR1P21757 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MSR1P21757 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
MSR1P21757 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.27□□□□□ -0.29
MSR1P21757 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.27□□□□□ -0.29
MSR1P21757 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
MSR1P21757 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
MSR1P21757 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
MSR1P21757 DGCR5-201ENST00000399539 862 ntBASIC13.27□□□□□ -0.29
MSR1P21757 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.27□□□□□ -0.29
MSR1P21757 EIF3FP3-201ENST00000434851 1086 ntBASIC13.27□□□□□ -0.29
MSR1P21757 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
MSR1P21757 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
MSR1P21757 AC093433.1-201ENST00000458048 571 ntBASIC13.27□□□□□ -0.29
MSR1P21757 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
MSR1P21757 AC026434.2-201ENST00000506094 1078 ntBASIC13.27□□□□□ -0.29
MSR1P21757 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.27□□□□□ -0.29
MSR1P21757 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.27□□□□□ -0.29
MSR1P21757 AC027307.3-201ENST00000594262 1100 ntBASIC13.27□□□□□ -0.29
MSR1P21757 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.27□□□□□ -0.29
MSR1P21757 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
MSR1P21757 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
MSR1P21757 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
MSR1P21757 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
MSR1P21757 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.27□□□□□ -0.29
MSR1P21757 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
MSR1P21757 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.27□□□□□ -0.29
MSR1P21757 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MSR1P21757 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
MSR1P21757 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.27□□□□□ -0.29
MSR1P21757 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MSR1P21757 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MSR1P21757 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
MSR1P21757 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
MSR1P21757 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MSR1P21757 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
MSR1P21757 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
MSR1P21757 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.27□□□□□ -0.29
MSR1P21757 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
MSR1P21757 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
MSR1P21757 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
MSR1P21757 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
MSR1P21757 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
MSR1P21757 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
MSR1P21757 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
MSR1P21757 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.26□□□□□ -0.29
MSR1P21757 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
MSR1P21757 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
MSR1P21757 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.26□□□□□ -0.29
MSR1P21757 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
MSR1P21757 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
MSR1P21757 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 AP006294.1-201ENST00000415407 339 ntBASIC13.26□□□□□ -0.29
MSR1P21757 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
MSR1P21757 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.26□□□□□ -0.29
MSR1P21757 HMGN1P19-201ENST00000436976 333 ntBASIC13.26□□□□□ -0.29
MSR1P21757 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.26□□□□□ -0.29
MSR1P21757 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.26□□□□□ -0.29
MSR1P21757 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
MSR1P21757 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.26□□□□□ -0.29
MSR1P21757 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.26□□□□□ -0.29
MSR1P21757 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.26□□□□□ -0.29
MSR1P21757 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
MSR1P21757 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
MSR1P21757 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
MSR1P21757 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms