Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
TNFRSF1BP20333 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 AGGF1P1-201ENST00000509500 2073 ntBASIC13.96□□□□□ -0.17
TNFRSF1BP20333 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 DUX4L27-201ENST00000554796 1261 ntBASIC13.96□□□□□ -0.17
TNFRSF1BP20333 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TNFRSF1BP20333 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.96□□□□□ -0.18
TNFRSF1BP20333 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
TNFRSF1BP20333 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TNFRSF1BP20333 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
TNFRSF1BP20333 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TNFRSF1BP20333 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
TNFRSF1BP20333 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TNFRSF1BP20333 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TNFRSF1BP20333 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.96□□□□□ -0.18
TNFRSF1BP20333 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TNFRSF1BP20333 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
TNFRSF1BP20333 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TNFRSF1BP20333 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TNFRSF1BP20333 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.96□□□□□ -0.18
TNFRSF1BP20333 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
TNFRSF1BP20333 BEND3P1-201ENST00000421591 1944 ntBASIC13.96□□□□□ -0.18
TNFRSF1BP20333 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
TNFRSF1BP20333 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 CICP16-201ENST00000502609 2813 ntBASIC13.95□□□□□ -0.18
TNFRSF1BP20333 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 FAM86GP-201ENST00000448322 971 ntBASIC13.95□□□□□ -0.18
TNFRSF1BP20333 VDAC1P7-201ENST00000462417 847 ntBASIC13.95□□□□□ -0.18
TNFRSF1BP20333 FAM86LP-201ENST00000478302 853 ntBASIC13.95□□□□□ -0.18
TNFRSF1BP20333 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 AC135586.1-201ENST00000539323 574 ntBASIC13.95□□□□□ -0.18
TNFRSF1BP20333 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 AL049840.4-201ENST00000602422 811 ntBASIC13.95□□□□□ -0.18
TNFRSF1BP20333 SRD5A3P1-201ENST00000603021 949 ntBASIC13.95□□□□□ -0.18
TNFRSF1BP20333 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFRSF1BP20333 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms