Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLUP10909 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLUP10909 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.57□□□□□ -0.24
CLUP10909 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLUP10909 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLUP10909 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.57□□□□□ -0.24
CLUP10909 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLUP10909 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLUP10909 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.57□□□□□ -0.24
CLUP10909 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLUP10909 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLUP10909 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLUP10909 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLUP10909 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLUP10909 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLUP10909 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CLUP10909 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLUP10909 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLUP10909 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLUP10909 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLUP10909 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLUP10909 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLUP10909 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.56□□□□□ -0.24
CLUP10909 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLUP10909 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CLUP10909 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLUP10909 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLUP10909 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CLUP10909 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLUP10909 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CLUP10909 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLUP10909 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
CLUP10909 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.56□□□□□ -0.24
CLUP10909 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLUP10909 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLUP10909 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLUP10909 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CLUP10909 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLUP10909 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLUP10909 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLUP10909 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.56□□□□□ -0.24
CLUP10909 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLUP10909 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.56□□□□□ -0.24
CLUP10909 HLA-K-203ENST00000430151 1046 ntBASIC13.56□□□□□ -0.24
CLUP10909 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.56□□□□□ -0.24
CLUP10909 AC114501.2-201ENST00000439631 535 ntBASIC13.56□□□□□ -0.24
CLUP10909 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.56□□□□□ -0.24
CLUP10909 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.56□□□□□ -0.24
CLUP10909 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.56□□□□□ -0.24
CLUP10909 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.56□□□□□ -0.24
CLUP10909 AC025678.2-201ENST00000562061 970 ntBASIC13.56□□□□□ -0.24
CLUP10909 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.56□□□□□ -0.24
CLUP10909 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.56□□□□□ -0.24
CLUP10909 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLUP10909 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLUP10909 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
CLUP10909 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CLUP10909 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLUP10909 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CLUP10909 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLUP10909 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.56□□□□□ -0.24
CLUP10909 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLUP10909 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLUP10909 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CLUP10909 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
CLUP10909 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.56□□□□□ -0.24
CLUP10909 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLUP10909 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLUP10909 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.55□□□□□ -0.24
CLUP10909 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.55□□□□□ -0.24
CLUP10909 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLUP10909 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.55□□□□□ -0.24
CLUP10909 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLUP10909 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLUP10909 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CLUP10909 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLUP10909 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLUP10909 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLUP10909 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLUP10909 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLUP10909 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.55□□□□□ -0.24
CLUP10909 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.55□□□□□ -0.24
CLUP10909 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLUP10909 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLUP10909 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLUP10909 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLUP10909 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.55□□□□□ -0.24
CLUP10909 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLUP10909 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.55□□□□□ -0.24
CLUP10909 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.55□□□□□ -0.24
CLUP10909 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.55□□□□□ -0.24
CLUP10909 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.55□□□□□ -0.24
CLUP10909 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLUP10909 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLUP10909 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLUP10909 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLUP10909 AL354702.1-201ENST00000442006 1960 ntBASIC13.55□□□□□ -0.24
CLUP10909 AL158070.2-201ENST00000623713 1621 ntBASIC13.55□□□□□ -0.24
CLUP10909 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLUP10909 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms