Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RN7SL769P-201ENST00000469386 295 ntBASIC17.52■□□□□ 0.4
HLA-DOAP06340 RN7SL720P-201ENST00000488178 304 ntBASIC17.52■□□□□ 0.4
HLA-DOAP06340 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.52■□□□□ 0.4
HLA-DOAP06340 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.52■□□□□ 0.4
HLA-DOAP06340 SCARNA21-201ENST00000517026 139 ntBASIC17.52■□□□□ 0.4
HLA-DOAP06340 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DOAP06340 AC009779.1-201ENST00000551138 283 ntBASIC17.52■□□□□ 0.4
HLA-DOAP06340 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.52■□□□□ 0.4
HLA-DOAP06340 AL161670.2-201ENST00000557650 1227 ntBASIC17.52■□□□□ 0.4
HLA-DOAP06340 AC105129.2-201ENST00000559536 390 ntBASIC17.52■□□□□ 0.4
HLA-DOAP06340 AC097724.1-201ENST00000609581 426 ntBASIC17.52■□□□□ 0.4
HLA-DOAP06340 NAP1L6-202ENST00000641404 1222 ntBASIC17.52■□□□□ 0.4
HLA-DOAP06340 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DOAP06340 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DOAP06340 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.52■□□□□ 0.4
HLA-DOAP06340 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.52■□□□□ 0.4
HLA-DOAP06340 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HLA-DOAP06340 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HLA-DOAP06340 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.52■□□□□ 0.39
HLA-DOAP06340 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.52■□□□□ 0.39
HLA-DOAP06340 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HLA-DOAP06340 AC105917.1-201ENST00000506637 2539 ntBASIC17.52■□□□□ 0.39
HLA-DOAP06340 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
HLA-DOAP06340 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
HLA-DOAP06340 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HLA-DOAP06340 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.52■□□□□ 0.39
HLA-DOAP06340 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DOAP06340 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DOAP06340 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DOAP06340 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DOAP06340 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HLA-DOAP06340 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
HLA-DOAP06340 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DOAP06340 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DOAP06340 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
HLA-DOAP06340 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.51■□□□□ 0.39
HLA-DOAP06340 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HLA-DOAP06340 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DOAP06340 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.51■□□□□ 0.39
HLA-DOAP06340 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
HLA-DOAP06340 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DOAP06340 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DOAP06340 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
HLA-DOAP06340 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DOAP06340 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DOAP06340 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DOAP06340 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DOAP06340 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DOAP06340 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
HLA-DOAP06340 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.51■□□□□ 0.39
HLA-DOAP06340 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DOAP06340 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DOAP06340 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.51■□□□□ 0.39
HLA-DOAP06340 AL157407.1-201ENST00000435784 904 ntBASIC17.51■□□□□ 0.39
HLA-DOAP06340 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.51■□□□□ 0.39
HLA-DOAP06340 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.51■□□□□ 0.39
HLA-DOAP06340 LINC01101-201ENST00000622953 1884 ntBASIC17.51■□□□□ 0.39
HLA-DOAP06340 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DOAP06340 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DOAP06340 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.51■□□□□ 0.39
HLA-DOAP06340 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.51■□□□□ 0.39
HLA-DOAP06340 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DOAP06340 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DOAP06340 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DOAP06340 AL136172.1-201ENST00000598590 1394 ntBASIC17.51■□□□□ 0.39
HLA-DOAP06340 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DOAP06340 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DOAP06340 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DOAP06340 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HLA-DOAP06340 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DOAP06340 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DOAP06340 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DOAP06340 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HLA-DOAP06340 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DOAP06340 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DOAP06340 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DOAP06340 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DOAP06340 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DOAP06340 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HLA-DOAP06340 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DOAP06340 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DOAP06340 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.5■□□□□ 0.39
HLA-DOAP06340 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.5■□□□□ 0.39
HLA-DOAP06340 AC090857.1-201ENST00000527400 390 ntBASIC17.5■□□□□ 0.39
HLA-DOAP06340 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DOAP06340 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.5■□□□□ 0.39
HLA-DOAP06340 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DOAP06340 FAM90A7P-201ENST00000382628 1395 ntBASIC17.5■□□□□ 0.39
HLA-DOAP06340 FAM90A23P-201ENST00000400136 1395 ntBASIC17.5■□□□□ 0.39
HLA-DOAP06340 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DOAP06340 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.5■□□□□ 0.39
HLA-DOAP06340 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
HLA-DOAP06340 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DOAP06340 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.5■□□□□ 0.39
HLA-DOAP06340 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DOAP06340 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DOAP06340 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HLA-DOAP06340 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
HLA-DOAP06340 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DOAP06340 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms