Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL5A2P05997 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL5A2P05997 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL5A2P05997 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL5A2P05997 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC19.12■□□□□ 0.65
COL5A2P05997 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC19.12■□□□□ 0.65
COL5A2P05997 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL5A2P05997 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL5A2P05997 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL5A2P05997 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.12■□□□□ 0.65
COL5A2P05997 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL5A2P05997 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC19.11■□□□□ 0.65
COL5A2P05997 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.11■□□□□ 0.65
COL5A2P05997 LAP3P2-201ENST00000454686 1454 ntBASIC19.11■□□□□ 0.65
COL5A2P05997 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.11■□□□□ 0.65
COL5A2P05997 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.11■□□□□ 0.65
COL5A2P05997 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
COL5A2P05997 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL5A2P05997 MIR566-201ENST00000385187 94 ntBASIC19.11■□□□□ 0.65
COL5A2P05997 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC19.11■□□□□ 0.65
COL5A2P05997 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL5A2P05997 AC013553.1-201ENST00000560906 267 ntBASIC19.11■□□□□ 0.65
COL5A2P05997 ABHD17AP9-201ENST00000561925 548 ntBASIC19.11■□□□□ 0.65
COL5A2P05997 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC19.11■□□□□ 0.65
COL5A2P05997 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC19.11■□□□□ 0.65
COL5A2P05997 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
COL5A2P05997 DGAT2L7P-201ENST00000602462 744 ntBASIC19.11■□□□□ 0.65
COL5A2P05997 AL139339.2-201ENST00000608063 657 ntBASIC19.11■□□□□ 0.65
COL5A2P05997 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
COL5A2P05997 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC19.11■□□□□ 0.65
COL5A2P05997 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC19.11■□□□□ 0.65
COL5A2P05997 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL5A2P05997 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL5A2P05997 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC19.11■□□□□ 0.65
COL5A2P05997 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL5A2P05997 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.11■□□□□ 0.65
COL5A2P05997 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
COL5A2P05997 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL5A2P05997 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL5A2P05997 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC19.11■□□□□ 0.65
COL5A2P05997 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.11■□□□□ 0.65
COL5A2P05997 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
COL5A2P05997 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.11■□□□□ 0.65
COL5A2P05997 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC19.11■□□□□ 0.65
COL5A2P05997 PCDHA1-201ENST00000378133 2726 ntBASIC19.11■□□□□ 0.65
COL5A2P05997 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL5A2P05997 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
COL5A2P05997 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL5A2P05997 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL5A2P05997 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL5A2P05997 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL5A2P05997 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL5A2P05997 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL5A2P05997 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
COL5A2P05997 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC19.1■□□□□ 0.65
COL5A2P05997 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC19.1■□□□□ 0.65
COL5A2P05997 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL5A2P05997 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC19.1■□□□□ 0.65
COL5A2P05997 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
COL5A2P05997 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC19.1■□□□□ 0.65
COL5A2P05997 AC006548.2-201ENST00000605217 529 ntBASIC19.1■□□□□ 0.65
COL5A2P05997 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL5A2P05997 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL5A2P05997 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
COL5A2P05997 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL5A2P05997 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
COL5A2P05997 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.1■□□□□ 0.65
COL5A2P05997 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL5A2P05997 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL5A2P05997 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
COL5A2P05997 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL5A2P05997 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
COL5A2P05997 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL5A2P05997 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL5A2P05997 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL5A2P05997 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC19.1■□□□□ 0.65
COL5A2P05997 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
COL5A2P05997 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL5A2P05997 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
COL5A2P05997 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL5A2P05997 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL5A2P05997 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL5A2P05997 BAX-205ENST00000391871 687 ntTSL 5 BASIC19.09■□□□□ 0.65
COL5A2P05997 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL5A2P05997 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL5A2P05997 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC19.09■□□□□ 0.65
COL5A2P05997 RN7SL582P-201ENST00000491078 279 ntBASIC19.09■□□□□ 0.65
COL5A2P05997 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC19.09■□□□□ 0.65
COL5A2P05997 KLF17P1-201ENST00000547105 1126 ntBASIC19.09■□□□□ 0.65
COL5A2P05997 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC19.09■□□□□ 0.65
COL5A2P05997 SRP14-204ENST00000558720 780 ntTSL 2 BASIC19.09■□□□□ 0.65
COL5A2P05997 AC008972.2-201ENST00000606587 494 ntBASIC19.09■□□□□ 0.65
COL5A2P05997 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC19.09■□□□□ 0.65
COL5A2P05997 CASP16P-204ENST00000635032 809 ntBASIC19.09■□□□□ 0.65
COL5A2P05997 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL5A2P05997 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL5A2P05997 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL5A2P05997 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
COL5A2P05997 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL5A2P05997 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms