Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR3DP05423 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR3DP05423 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
POLR3DP05423 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
POLR3DP05423 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR3DP05423 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR3DP05423 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
POLR3DP05423 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR3DP05423 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
POLR3DP05423 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.89■□□□□ 0.45
POLR3DP05423 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.89■□□□□ 0.45
POLR3DP05423 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.89■□□□□ 0.45
POLR3DP05423 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.89■□□□□ 0.45
POLR3DP05423 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
POLR3DP05423 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.89■□□□□ 0.45
POLR3DP05423 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.89■□□□□ 0.45
POLR3DP05423 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.89■□□□□ 0.45
POLR3DP05423 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.89■□□□□ 0.45
POLR3DP05423 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR3DP05423 AL022328.3-201ENST00000607943 679 ntBASIC17.89■□□□□ 0.45
POLR3DP05423 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.89■□□□□ 0.45
POLR3DP05423 AL096828.3-201ENST00000615354 462 ntBASIC17.89■□□□□ 0.45
POLR3DP05423 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
POLR3DP05423 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
POLR3DP05423 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.89■□□□□ 0.45
POLR3DP05423 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR3DP05423 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
POLR3DP05423 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
POLR3DP05423 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
POLR3DP05423 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
POLR3DP05423 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR3DP05423 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.89■□□□□ 0.45
POLR3DP05423 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR3DP05423 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
POLR3DP05423 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.89■□□□□ 0.45
POLR3DP05423 AL161772.1-201ENST00000610494 4412 ntBASIC17.88■□□□□ 0.45
POLR3DP05423 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
POLR3DP05423 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
POLR3DP05423 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
POLR3DP05423 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
POLR3DP05423 MROH4P-201ENST00000431302 1578 ntBASIC17.88■□□□□ 0.45
POLR3DP05423 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR3DP05423 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR3DP05423 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR3DP05423 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR3DP05423 REXO1L2P-201ENST00000425429 2069 ntBASIC17.88■□□□□ 0.45
POLR3DP05423 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR3DP05423 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
POLR3DP05423 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
POLR3DP05423 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR3DP05423 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.88■□□□□ 0.45
POLR3DP05423 AC006033.1-201ENST00000440505 426 ntBASIC17.88■□□□□ 0.45
POLR3DP05423 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.88■□□□□ 0.45
POLR3DP05423 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
POLR3DP05423 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.88■□□□□ 0.45
POLR3DP05423 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.88■□□□□ 0.45
POLR3DP05423 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.88■□□□□ 0.45
POLR3DP05423 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
POLR3DP05423 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR3DP05423 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.88■□□□□ 0.45
POLR3DP05423 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.88■□□□□ 0.45
POLR3DP05423 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
POLR3DP05423 CICP23-201ENST00000605013 2741 ntBASIC17.88■□□□□ 0.45
POLR3DP05423 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR3DP05423 WASH3P-207ENST00000560956 1394 ntBASIC17.88■□□□□ 0.45
POLR3DP05423 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR3DP05423 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.88■□□□□ 0.45
POLR3DP05423 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR3DP05423 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
POLR3DP05423 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
POLR3DP05423 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR3DP05423 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.88■□□□□ 0.45
POLR3DP05423 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR3DP05423 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
POLR3DP05423 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR3DP05423 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
POLR3DP05423 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
POLR3DP05423 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR3DP05423 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR3DP05423 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR3DP05423 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
POLR3DP05423 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
POLR3DP05423 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR3DP05423 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
POLR3DP05423 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
POLR3DP05423 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
POLR3DP05423 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR3DP05423 AL513477.1-201ENST00000602865 2407 ntBASIC17.87■□□□□ 0.45
POLR3DP05423 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
POLR3DP05423 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
POLR3DP05423 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.87■□□□□ 0.45
POLR3DP05423 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR3DP05423 MIR1247-201ENST00000408206 136 ntBASIC17.87■□□□□ 0.45
POLR3DP05423 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
POLR3DP05423 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
POLR3DP05423 HIST2H2BB-201ENST00000449108 381 ntBASIC17.87■□□□□ 0.45
POLR3DP05423 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.87■□□□□ 0.45
POLR3DP05423 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
POLR3DP05423 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.87■□□□□ 0.45
POLR3DP05423 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms