Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
VTNP04004 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VTNP04004 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VTNP04004 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
VTNP04004 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.3■□□□□ 0.2
VTNP04004 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VTNP04004 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
VTNP04004 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
VTNP04004 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VTNP04004 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.3■□□□□ 0.2
VTNP04004 AC012441.2-201ENST00000444843 739 ntBASIC16.3■□□□□ 0.2
VTNP04004 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.3■□□□□ 0.2
VTNP04004 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.3■□□□□ 0.2
VTNP04004 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
VTNP04004 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.3■□□□□ 0.2
VTNP04004 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.3■□□□□ 0.2
VTNP04004 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.3■□□□□ 0.2
VTNP04004 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.3■□□□□ 0.2
VTNP04004 AC105129.2-201ENST00000559536 390 ntBASIC16.3■□□□□ 0.2
VTNP04004 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.3■□□□□ 0.2
VTNP04004 SNORD3B-2-202ENST00000571722 791 ntBASIC16.3■□□□□ 0.2
VTNP04004 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VTNP04004 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VTNP04004 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
VTNP04004 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
VTNP04004 AL136295.7-201ENST00000619226 1200 ntBASIC16.3■□□□□ 0.2
VTNP04004 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.3■□□□□ 0.2
VTNP04004 AL805961.1-203ENST00000641078 1258 ntBASIC16.3■□□□□ 0.2
VTNP04004 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.3■□□□□ 0.2
VTNP04004 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VTNP04004 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
VTNP04004 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.3■□□□□ 0.2
VTNP04004 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
VTNP04004 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VTNP04004 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VTNP04004 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VTNP04004 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VTNP04004 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
VTNP04004 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VTNP04004 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.3■□□□□ 0.2
VTNP04004 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VTNP04004 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VTNP04004 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VTNP04004 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VTNP04004 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VTNP04004 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
VTNP04004 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
VTNP04004 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VTNP04004 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
VTNP04004 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
VTNP04004 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.29■□□□□ 0.2
VTNP04004 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VTNP04004 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.29■□□□□ 0.2
VTNP04004 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
VTNP04004 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VTNP04004 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VTNP04004 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
VTNP04004 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VTNP04004 Z97180.1-201ENST00000445173 988 ntBASIC16.29■□□□□ 0.2
VTNP04004 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.29■□□□□ 0.2
VTNP04004 HLA-J-204ENST00000495278 958 ntBASIC16.29■□□□□ 0.2
VTNP04004 AC125604.1-201ENST00000496255 707 ntBASIC16.29■□□□□ 0.2
VTNP04004 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.29■□□□□ 0.2
VTNP04004 SCARNA21-201ENST00000517026 139 ntBASIC16.29■□□□□ 0.2
VTNP04004 RNA5SP423-201ENST00000517127 109 ntBASIC16.29■□□□□ 0.2
VTNP04004 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
VTNP04004 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.29■□□□□ 0.2
VTNP04004 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VTNP04004 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VTNP04004 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.29■□□□□ 0.2
VTNP04004 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VTNP04004 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VTNP04004 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VTNP04004 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VTNP04004 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VTNP04004 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VTNP04004 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
VTNP04004 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.29■□□□□ 0.2
VTNP04004 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
VTNP04004 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VTNP04004 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VTNP04004 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VTNP04004 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VTNP04004 AP002414.2-201ENST00000591780 3365 ntBASIC16.28■□□□□ 0.2
VTNP04004 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VTNP04004 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VTNP04004 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VTNP04004 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.28■□□□□ 0.2
VTNP04004 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VTNP04004 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VTNP04004 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VTNP04004 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VTNP04004 AL008707.1-201ENST00000422498 534 ntBASIC16.28■□□□□ 0.2
VTNP04004 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.28■□□□□ 0.2
VTNP04004 UPF3AP2-201ENST00000457924 1132 ntBASIC16.28■□□□□ 0.2
VTNP04004 IMP3P2-201ENST00000489760 475 ntBASIC16.28■□□□□ 0.2
VTNP04004 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.28■□□□□ 0.2
VTNP04004 AC245884.6-201ENST00000515672 1067 ntBASIC16.28■□□□□ 0.2
VTNP04004 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.28■□□□□ 0.2
VTNP04004 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms