Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
OPN1SWP03999 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
OPN1SWP03999 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
OPN1SWP03999 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
OPN1SWP03999 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
OPN1SWP03999 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.05□□□□□ -0.16
OPN1SWP03999 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.05□□□□□ -0.16
OPN1SWP03999 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
OPN1SWP03999 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.04□□□□□ -0.16
OPN1SWP03999 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.04□□□□□ -0.16
OPN1SWP03999 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
OPN1SWP03999 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
OPN1SWP03999 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.04□□□□□ -0.16
OPN1SWP03999 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
OPN1SWP03999 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.04□□□□□ -0.16
OPN1SWP03999 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.04□□□□□ -0.16
OPN1SWP03999 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.04□□□□□ -0.16
OPN1SWP03999 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
OPN1SWP03999 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.04□□□□□ -0.16
OPN1SWP03999 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.04□□□□□ -0.16
OPN1SWP03999 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.04□□□□□ -0.16
OPN1SWP03999 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.04□□□□□ -0.16
OPN1SWP03999 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.04□□□□□ -0.16
OPN1SWP03999 AC135586.1-201ENST00000539323 574 ntBASIC14.04□□□□□ -0.16
OPN1SWP03999 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.04□□□□□ -0.16
OPN1SWP03999 DUX4L27-201ENST00000554796 1261 ntBASIC14.04□□□□□ -0.16
OPN1SWP03999 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.04□□□□□ -0.16
OPN1SWP03999 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.04□□□□□ -0.16
OPN1SWP03999 SRD5A3P1-201ENST00000603021 949 ntBASIC14.04□□□□□ -0.16
OPN1SWP03999 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 AC079781.4-201ENST00000641908 219 ntBASIC14.04□□□□□ -0.16
OPN1SWP03999 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
OPN1SWP03999 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.04□□□□□ -0.16
OPN1SWP03999 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.04□□□□□ -0.16
OPN1SWP03999 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.04□□□□□ -0.16
OPN1SWP03999 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
OPN1SWP03999 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.04□□□□□ -0.16
OPN1SWP03999 AL138799.1-201ENST00000448213 1675 ntBASIC14.04□□□□□ -0.16
OPN1SWP03999 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
OPN1SWP03999 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.04□□□□□ -0.16
OPN1SWP03999 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
OPN1SWP03999 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.03□□□□□ -0.16
OPN1SWP03999 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.03□□□□□ -0.16
OPN1SWP03999 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
OPN1SWP03999 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
OPN1SWP03999 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
OPN1SWP03999 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
OPN1SWP03999 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
OPN1SWP03999 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.03□□□□□ -0.16
OPN1SWP03999 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
OPN1SWP03999 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.03□□□□□ -0.16
OPN1SWP03999 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
OPN1SWP03999 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
OPN1SWP03999 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
OPN1SWP03999 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.03□□□□□ -0.16
OPN1SWP03999 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
OPN1SWP03999 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.03□□□□□ -0.16
OPN1SWP03999 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
OPN1SWP03999 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
OPN1SWP03999 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
OPN1SWP03999 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
OPN1SWP03999 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
OPN1SWP03999 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
OPN1SWP03999 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
OPN1SWP03999 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
OPN1SWP03999 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.03□□□□□ -0.16
OPN1SWP03999 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.03□□□□□ -0.16
OPN1SWP03999 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.03□□□□□ -0.16
OPN1SWP03999 VDAC1P7-201ENST00000462417 847 ntBASIC14.03□□□□□ -0.16
OPN1SWP03999 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
OPN1SWP03999 FAM86LP-201ENST00000478302 853 ntBASIC14.03□□□□□ -0.16
OPN1SWP03999 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.03□□□□□ -0.16
OPN1SWP03999 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
OPN1SWP03999 AC036164.1-201ENST00000570544 333 ntBASIC14.03□□□□□ -0.16
OPN1SWP03999 AL049840.4-201ENST00000602422 811 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms