Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 LILRP1-201ENST00000444199 1370 ntBASIC11.9□□□□□ -0.5
IFNA1P01562 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
IFNA1P01562 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
IFNA1P01562 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
IFNA1P01562 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
IFNA1P01562 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
IFNA1P01562 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
IFNA1P01562 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
IFNA1P01562 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
IFNA1P01562 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
IFNA1P01562 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC11.89□□□□□ -0.51
IFNA1P01562 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC11.89□□□□□ -0.51
IFNA1P01562 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
IFNA1P01562 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC11.89□□□□□ -0.51
IFNA1P01562 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
IFNA1P01562 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC11.89□□□□□ -0.51
IFNA1P01562 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
IFNA1P01562 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC11.89□□□□□ -0.51
IFNA1P01562 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
IFNA1P01562 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
IFNA1P01562 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC11.89□□□□□ -0.51
IFNA1P01562 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC11.89□□□□□ -0.51
IFNA1P01562 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC11.89□□□□□ -0.51
IFNA1P01562 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
IFNA1P01562 AC108073.2-201ENST00000464002 357 ntBASIC11.89□□□□□ -0.51
IFNA1P01562 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
IFNA1P01562 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC11.89□□□□□ -0.51
IFNA1P01562 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC11.89□□□□□ -0.51
IFNA1P01562 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11.89□□□□□ -0.51
IFNA1P01562 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC11.89□□□□□ -0.51
IFNA1P01562 PNMT-203ENST00000581428 677 ntTSL 2 BASIC11.89□□□□□ -0.51
IFNA1P01562 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
IFNA1P01562 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC11.89□□□□□ -0.51
IFNA1P01562 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC11.89□□□□□ -0.51
IFNA1P01562 AC004790.2-201ENST00000623588 572 ntBASIC11.89□□□□□ -0.51
IFNA1P01562 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC11.89□□□□□ -0.51
IFNA1P01562 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.89□□□□□ -0.51
IFNA1P01562 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
IFNA1P01562 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC11.89□□□□□ -0.51
IFNA1P01562 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC11.89□□□□□ -0.51
IFNA1P01562 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC11.89□□□□□ -0.51
IFNA1P01562 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC11.89□□□□□ -0.51
IFNA1P01562 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
IFNA1P01562 AC020910.6-201ENST00000623084 1459 ntBASIC11.89□□□□□ -0.51
IFNA1P01562 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
IFNA1P01562 CES1P1-201ENST00000421606 1704 ntBASIC11.89□□□□□ -0.51
IFNA1P01562 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC11.88□□□□□ -0.51
IFNA1P01562 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC11.88□□□□□ -0.51
IFNA1P01562 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
IFNA1P01562 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC11.88□□□□□ -0.51
IFNA1P01562 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC11.88□□□□□ -0.51
IFNA1P01562 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC11.88□□□□□ -0.51
IFNA1P01562 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
IFNA1P01562 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC11.88□□□□□ -0.51
IFNA1P01562 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms