Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CLPXO76031 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLPXO76031 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.69□□□□□ -0.22
CLPXO76031 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CLPXO76031 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
CLPXO76031 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.69□□□□□ -0.22
CLPXO76031 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLPXO76031 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.69□□□□□ -0.22
CLPXO76031 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.69□□□□□ -0.22
CLPXO76031 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.69□□□□□ -0.22
CLPXO76031 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
CLPXO76031 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.69□□□□□ -0.22
CLPXO76031 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLPXO76031 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.69□□□□□ -0.22
CLPXO76031 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLPXO76031 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.69□□□□□ -0.22
CLPXO76031 PCDHB18P-202ENST00000526308 3197 ntBASIC13.69□□□□□ -0.22
CLPXO76031 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLPXO76031 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLPXO76031 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLPXO76031 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLPXO76031 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
CLPXO76031 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLPXO76031 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CLPXO76031 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.69□□□□□ -0.22
CLPXO76031 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLPXO76031 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLPXO76031 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLPXO76031 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.69□□□□□ -0.22
CLPXO76031 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.69□□□□□ -0.22
CLPXO76031 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLPXO76031 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLPXO76031 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLPXO76031 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLPXO76031 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLPXO76031 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CLPXO76031 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLPXO76031 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLPXO76031 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLPXO76031 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLPXO76031 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CLPXO76031 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLPXO76031 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CLPXO76031 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CLPXO76031 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.68□□□□□ -0.22
CLPXO76031 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLPXO76031 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CLPXO76031 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLPXO76031 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
CLPXO76031 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLPXO76031 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.68□□□□□ -0.22
CLPXO76031 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLPXO76031 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.68□□□□□ -0.22
CLPXO76031 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLPXO76031 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLPXO76031 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLPXO76031 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLPXO76031 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLPXO76031 AL691432.1-201ENST00000596308 1422 ntBASIC13.68□□□□□ -0.22
CLPXO76031 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLPXO76031 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.68□□□□□ -0.22
CLPXO76031 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CLPXO76031 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLPXO76031 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLPXO76031 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLPXO76031 HTR5BP-201ENST00000430851 1154 ntBASIC13.68□□□□□ -0.22
CLPXO76031 METTL21AP1-201ENST00000438852 635 ntBASIC13.68□□□□□ -0.22
CLPXO76031 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.68□□□□□ -0.22
CLPXO76031 ALG1L5P-201ENST00000482043 771 ntBASIC13.68□□□□□ -0.22
CLPXO76031 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.68□□□□□ -0.22
CLPXO76031 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.68□□□□□ -0.22
CLPXO76031 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.68□□□□□ -0.22
CLPXO76031 AC022447.6-201ENST00000515522 438 ntBASIC13.68□□□□□ -0.22
CLPXO76031 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLPXO76031 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
CLPXO76031 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.68□□□□□ -0.22
CLPXO76031 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.68□□□□□ -0.22
CLPXO76031 AC092865.6-201ENST00000642101 219 ntBASIC13.68□□□□□ -0.22
CLPXO76031 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLPXO76031 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLPXO76031 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLPXO76031 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.68□□□□□ -0.22
CLPXO76031 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLPXO76031 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLPXO76031 TCAM1P-207ENST00000485295 1537 ntBASIC13.68□□□□□ -0.22
CLPXO76031 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.68□□□□□ -0.22
CLPXO76031 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLPXO76031 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.68□□□□□ -0.22
CLPXO76031 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLPXO76031 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.68□□□□□ -0.22
CLPXO76031 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CLPXO76031 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.68□□□□□ -0.22
CLPXO76031 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLPXO76031 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLPXO76031 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLPXO76031 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLPXO76031 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.67□□□□□ -0.22
CLPXO76031 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLPXO76031 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLPXO76031 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms