Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PRAMEF11O60813 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PRAMEF11O60813 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRAMEF11O60813 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PRAMEF11O60813 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.12■□□□□ 0.01
PRAMEF11O60813 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.12■□□□□ 0.01
PRAMEF11O60813 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PRAMEF11O60813 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRAMEF11O60813 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
PRAMEF11O60813 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.12■□□□□ 0.01
PRAMEF11O60813 AL583810.1-201ENST00000553344 1045 ntBASIC15.12■□□□□ 0.01
PRAMEF11O60813 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.12■□□□□ 0.01
PRAMEF11O60813 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.12■□□□□ 0.01
PRAMEF11O60813 EEF1DP1-201ENST00000585891 896 ntBASIC15.12■□□□□ 0.01
PRAMEF11O60813 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.12■□□□□ 0.01
PRAMEF11O60813 AC009542.2-202ENST00000619004 1067 ntBASIC15.12■□□□□ 0.01
PRAMEF11O60813 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRAMEF11O60813 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRAMEF11O60813 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRAMEF11O60813 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRAMEF11O60813 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.12■□□□□ 0.01
PRAMEF11O60813 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRAMEF11O60813 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.12■□□□□ 0.01
PRAMEF11O60813 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRAMEF11O60813 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRAMEF11O60813 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PRAMEF11O60813 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PRAMEF11O60813 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF11O60813 AC113367.3-201ENST00000508316 1912 ntBASIC15.11■□□□□ 0.01
PRAMEF11O60813 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PRAMEF11O60813 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF11O60813 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PRAMEF11O60813 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.11■□□□□ 0.01
PRAMEF11O60813 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.11■□□□□ 0.01
PRAMEF11O60813 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF11O60813 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF11O60813 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.11■□□□□ 0.01
PRAMEF11O60813 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.11■□□□□ 0.01
PRAMEF11O60813 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF11O60813 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.11■□□□□ 0.01
PRAMEF11O60813 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF11O60813 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF11O60813 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF11O60813 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PRAMEF11O60813 AC010141.1-201ENST00000411585 623 ntBASIC15.11■□□□□ 0.01
PRAMEF11O60813 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF11O60813 RPS2P32-201ENST00000439199 892 ntBASIC15.11■□□□□ 0.01
PRAMEF11O60813 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.11■□□□□ 0.01
PRAMEF11O60813 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.11■□□□□ 0.01
PRAMEF11O60813 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF11O60813 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.11■□□□□ 0.01
PRAMEF11O60813 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.11■□□□□ 0.01
PRAMEF11O60813 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.11■□□□□ 0.01
PRAMEF11O60813 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.11■□□□□ 0.01
PRAMEF11O60813 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.11■□□□□ 0.01
PRAMEF11O60813 AC008825.2-201ENST00000603374 718 ntBASIC15.11■□□□□ 0.01
PRAMEF11O60813 AL136301.1-201ENST00000615830 422 ntBASIC15.11■□□□□ 0.01
PRAMEF11O60813 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF11O60813 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
PRAMEF11O60813 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF11O60813 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF11O60813 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF11O60813 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF11O60813 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF11O60813 AC140479.7-201ENST00000636301 2332 ntBASIC15.11■□□□□ 0.01
PRAMEF11O60813 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
PRAMEF11O60813 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.11■□□□□ 0.01
PRAMEF11O60813 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF11O60813 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF11O60813 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.11■□□□□ 0.01
PRAMEF11O60813 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF11O60813 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF11O60813 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRAMEF11O60813 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF11O60813 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.1■□□□□ 0.01
PRAMEF11O60813 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF11O60813 AC232323.1-201ENST00000540724 2099 ntBASIC15.1■□□□□ 0.01
PRAMEF11O60813 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.1■□□□□ 0.01
PRAMEF11O60813 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PRAMEF11O60813 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF11O60813 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF11O60813 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF11O60813 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF11O60813 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF11O60813 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PRAMEF11O60813 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
PRAMEF11O60813 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF11O60813 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PRAMEF11O60813 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.1■□□□□ 0.01
PRAMEF11O60813 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.1■□□□□ 0.01
PRAMEF11O60813 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF11O60813 AC079178.1-201ENST00000420915 656 ntBASIC15.1■□□□□ 0.01
PRAMEF11O60813 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.1■□□□□ 0.01
PRAMEF11O60813 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRAMEF11O60813 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.1■□□□□ 0.01
PRAMEF11O60813 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.1■□□□□ 0.01
PRAMEF11O60813 AC100850.1-201ENST00000506768 649 ntBASIC15.1■□□□□ 0.01
PRAMEF11O60813 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.1■□□□□ 0.01
PRAMEF11O60813 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PRAMEF11O60813 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms