Protein–RNA interactions for Protein: O60486

PLXNC1, Plexin-C1, humanhuman

Predictions only

Length 1,568 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNC1O60486 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PLXNC1O60486 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PLXNC1O60486 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC21.53■■□□□ 1.04
PLXNC1O60486 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PLXNC1O60486 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PLXNC1O60486 AC064801.2-201ENST00000625052 1303 ntBASIC21.53■■□□□ 1.04
PLXNC1O60486 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PLXNC1O60486 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
PLXNC1O60486 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PLXNC1O60486 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC21.53■■□□□ 1.04
PLXNC1O60486 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PLXNC1O60486 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC21.53■■□□□ 1.04
PLXNC1O60486 FTX-216ENST00000638985 1367 ntTSL 5 BASIC21.53■■□□□ 1.04
PLXNC1O60486 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PLXNC1O60486 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PLXNC1O60486 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PLXNC1O60486 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PLXNC1O60486 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PLXNC1O60486 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC21.53■■□□□ 1.04
PLXNC1O60486 RNVU1-8-201ENST00000364272 125 ntBASIC21.53■■□□□ 1.04
PLXNC1O60486 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PLXNC1O60486 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC21.53■■□□□ 1.04
PLXNC1O60486 AC098934.1-203ENST00000442868 1262 ntBASIC21.53■■□□□ 1.04
PLXNC1O60486 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC21.53■■□□□ 1.04
PLXNC1O60486 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC21.53■■□□□ 1.04
PLXNC1O60486 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PLXNC1O60486 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC21.53■■□□□ 1.04
PLXNC1O60486 USB1-205ENST00000561743 1135 ntTSL 3 BASIC21.53■■□□□ 1.04
PLXNC1O60486 AC055811.3-201ENST00000584952 686 ntBASIC21.53■■□□□ 1.04
PLXNC1O60486 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
PLXNC1O60486 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
PLXNC1O60486 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PLXNC1O60486 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC21.52■■□□□ 1.04
PLXNC1O60486 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
PLXNC1O60486 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PLXNC1O60486 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PLXNC1O60486 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
PLXNC1O60486 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PLXNC1O60486 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PLXNC1O60486 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PLXNC1O60486 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PLXNC1O60486 AGGF1P1-201ENST00000509500 2073 ntBASIC21.52■■□□□ 1.04
PLXNC1O60486 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC21.52■■□□□ 1.04
PLXNC1O60486 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PLXNC1O60486 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PLXNC1O60486 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PLXNC1O60486 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PLXNC1O60486 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
PLXNC1O60486 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PLXNC1O60486 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PLXNC1O60486 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PLXNC1O60486 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PLXNC1O60486 ACTBP7-201ENST00000418351 1124 ntBASIC21.52■■□□□ 1.04
PLXNC1O60486 KRT18P46-201ENST00000435568 1279 ntBASIC21.52■■□□□ 1.04
PLXNC1O60486 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC21.52■■□□□ 1.04
PLXNC1O60486 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC21.52■■□□□ 1.04
PLXNC1O60486 RN7SL564P-201ENST00000496309 250 ntBASIC21.52■■□□□ 1.04
PLXNC1O60486 SORD2P-201ENST00000558556 1069 ntBASIC21.52■■□□□ 1.04
PLXNC1O60486 HERC2P11-201ENST00000562845 725 ntBASIC21.52■■□□□ 1.04
PLXNC1O60486 AC100756.2-201ENST00000569537 736 ntBASIC21.52■■□□□ 1.04
PLXNC1O60486 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC21.52■■□□□ 1.04
PLXNC1O60486 AL133467.4-201ENST00000602953 725 ntBASIC21.52■■□□□ 1.04
PLXNC1O60486 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PLXNC1O60486 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
PLXNC1O60486 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC21.52■■□□□ 1.03
PLXNC1O60486 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PLXNC1O60486 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC21.52■■□□□ 1.03
PLXNC1O60486 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PLXNC1O60486 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PLXNC1O60486 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC21.51■■□□□ 1.03
PLXNC1O60486 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PLXNC1O60486 AC018442.1-201ENST00000421439 2061 ntBASIC21.51■■□□□ 1.03
PLXNC1O60486 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PLXNC1O60486 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PLXNC1O60486 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PLXNC1O60486 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC21.51■■□□□ 1.03
PLXNC1O60486 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
PLXNC1O60486 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PLXNC1O60486 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PLXNC1O60486 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC21.51■■□□□ 1.03
PLXNC1O60486 AC018638.5-201ENST00000450885 754 ntBASIC21.51■■□□□ 1.03
PLXNC1O60486 RN7SL23P-201ENST00000484055 275 ntBASIC21.51■■□□□ 1.03
PLXNC1O60486 AC095040.1-201ENST00000513286 675 ntBASIC21.51■■□□□ 1.03
PLXNC1O60486 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PLXNC1O60486 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PLXNC1O60486 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
PLXNC1O60486 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC21.51■■□□□ 1.03
PLXNC1O60486 RPS5-204ENST00000598098 536 ntTSL 2 BASIC21.51■■□□□ 1.03
PLXNC1O60486 PEBP1P2-201ENST00000603980 558 ntBASIC21.51■■□□□ 1.03
PLXNC1O60486 AC010976.2-201ENST00000609697 852 ntBASIC21.51■■□□□ 1.03
PLXNC1O60486 AGAP7P-201ENST00000582299 2062 ntBASIC21.51■■□□□ 1.03
PLXNC1O60486 AGAP14-201ENST00000624701 2060 ntBASIC21.51■■□□□ 1.03
PLXNC1O60486 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PLXNC1O60486 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
PLXNC1O60486 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PLXNC1O60486 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PLXNC1O60486 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PLXNC1O60486 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PLXNC1O60486 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PLXNC1O60486 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms