Protein–RNA interactions for Protein: O43583

DENR, Density-regulated protein, humanhuman

Known RBP Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENRO43583 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
DENRO43583 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DENRO43583 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DENRO43583 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DENRO43583 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DENRO43583 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.84□□□□□ -0.19
DENRO43583 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
DENRO43583 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DENRO43583 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DENRO43583 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
DENRO43583 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.84□□□□□ -0.19
DENRO43583 IGLL3P-201ENST00000412472 434 ntBASIC13.84□□□□□ -0.19
DENRO43583 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.84□□□□□ -0.19
DENRO43583 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.84□□□□□ -0.19
DENRO43583 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.84□□□□□ -0.19
DENRO43583 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
DENRO43583 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.84□□□□□ -0.19
DENRO43583 MIR3652-201ENST00000579335 131 ntBASIC13.84□□□□□ -0.19
DENRO43583 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.84□□□□□ -0.19
DENRO43583 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.84□□□□□ -0.19
DENRO43583 AGAP12P-201ENST00000585227 2359 ntBASIC13.84□□□□□ -0.19
DENRO43583 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
DENRO43583 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
DENRO43583 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
DENRO43583 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
DENRO43583 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
DENRO43583 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
DENRO43583 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
DENRO43583 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.84□□□□□ -0.19
DENRO43583 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DENRO43583 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DENRO43583 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
DENRO43583 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DENRO43583 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DENRO43583 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DENRO43583 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DENRO43583 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
DENRO43583 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
DENRO43583 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.19
DENRO43583 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
DENRO43583 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
DENRO43583 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
DENRO43583 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.83□□□□□ -0.2
DENRO43583 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.83□□□□□ -0.2
DENRO43583 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DENRO43583 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DENRO43583 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DENRO43583 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
DENRO43583 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.83□□□□□ -0.2
DENRO43583 AP001972.5-201ENST00000624624 2338 ntBASIC13.83□□□□□ -0.2
DENRO43583 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.83□□□□□ -0.2
DENRO43583 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DENRO43583 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DENRO43583 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
DENRO43583 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
DENRO43583 FO393414.2-201ENST00000405153 598 ntBASIC13.83□□□□□ -0.2
DENRO43583 AC142381.1-201ENST00000426099 345 ntBASIC13.83□□□□□ -0.2
DENRO43583 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.83□□□□□ -0.2
DENRO43583 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.83□□□□□ -0.2
DENRO43583 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
DENRO43583 AC091304.2-201ENST00000564639 760 ntBASIC13.83□□□□□ -0.2
DENRO43583 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
DENRO43583 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.83□□□□□ -0.2
DENRO43583 CLEC4GP1-201ENST00000596555 870 ntBASIC13.83□□□□□ -0.2
DENRO43583 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.83□□□□□ -0.2
DENRO43583 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.83□□□□□ -0.2
DENRO43583 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.83□□□□□ -0.2
DENRO43583 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.83□□□□□ -0.2
DENRO43583 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DENRO43583 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
DENRO43583 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DENRO43583 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.83□□□□□ -0.2
DENRO43583 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DENRO43583 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.83□□□□□ -0.2
DENRO43583 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.83□□□□□ -0.2
DENRO43583 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DENRO43583 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DENRO43583 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
DENRO43583 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DENRO43583 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
DENRO43583 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DENRO43583 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.82□□□□□ -0.2
DENRO43583 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
DENRO43583 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DENRO43583 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DENRO43583 AL355102.3-201ENST00000554299 1678 ntBASIC13.82□□□□□ -0.2
DENRO43583 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
DENRO43583 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.82□□□□□ -0.2
DENRO43583 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
DENRO43583 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DENRO43583 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.82□□□□□ -0.2
DENRO43583 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.82□□□□□ -0.2
DENRO43583 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
DENRO43583 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
DENRO43583 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DENRO43583 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.82□□□□□ -0.2
DENRO43583 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.82□□□□□ -0.2
DENRO43583 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
DENRO43583 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DENRO43583 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms