Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 AL158070.2-201ENST00000623713 1621 ntBASIC13.7□□□□□ -0.22
RNF13O43567 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF13O43567 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF13O43567 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RNF13O43567 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF13O43567 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF13O43567 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF13O43567 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RNF13O43567 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.7□□□□□ -0.22
RNF13O43567 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF13O43567 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RNF13O43567 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RNF13O43567 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF13O43567 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF13O43567 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF13O43567 SLC7A15P-201ENST00000424028 1363 ntBASIC13.7□□□□□ -0.22
RNF13O43567 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RNF13O43567 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF13O43567 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF13O43567 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF13O43567 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 AC092135.3-201ENST00000624151 1846 ntBASIC13.69□□□□□ -0.22
RNF13O43567 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.69□□□□□ -0.22
RNF13O43567 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RNF13O43567 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RNF13O43567 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.69□□□□□ -0.22
RNF13O43567 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.69□□□□□ -0.22
RNF13O43567 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF13O43567 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.69□□□□□ -0.22
RNF13O43567 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RNF13O43567 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF13O43567 AC134915.1-201ENST00000426461 574 ntBASIC13.69□□□□□ -0.22
RNF13O43567 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.69□□□□□ -0.22
RNF13O43567 AL353779.1-201ENST00000434793 351 ntBASIC13.69□□□□□ -0.22
RNF13O43567 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 UGT1A2P-201ENST00000454886 866 ntBASIC13.69□□□□□ -0.22
RNF13O43567 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.69□□□□□ -0.22
RNF13O43567 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.69□□□□□ -0.22
RNF13O43567 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.69□□□□□ -0.22
RNF13O43567 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.69□□□□□ -0.22
RNF13O43567 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.69□□□□□ -0.22
RNF13O43567 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.69□□□□□ -0.22
RNF13O43567 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.69□□□□□ -0.22
RNF13O43567 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.69□□□□□ -0.22
RNF13O43567 AC004233.3-201ENST00000607794 1269 ntBASIC13.69□□□□□ -0.22
RNF13O43567 AL662799.1-202ENST00000614205 422 ntBASIC13.69□□□□□ -0.22
RNF13O43567 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.69□□□□□ -0.22
RNF13O43567 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RNF13O43567 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.69□□□□□ -0.22
RNF13O43567 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.69□□□□□ -0.22
RNF13O43567 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RNF13O43567 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RNF13O43567 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.69□□□□□ -0.22
RNF13O43567 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
RNF13O43567 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF13O43567 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
RNF13O43567 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.69□□□□□ -0.22
RNF13O43567 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
RNF13O43567 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.69□□□□□ -0.22
RNF13O43567 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF13O43567 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.68□□□□□ -0.22
RNF13O43567 AC018442.1-201ENST00000421439 2061 ntBASIC13.68□□□□□ -0.22
RNF13O43567 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RNF13O43567 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.68□□□□□ -0.22
RNF13O43567 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF13O43567 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
RNF13O43567 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RNF13O43567 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF13O43567 AC093525.8-201ENST00000624099 1342 ntBASIC13.68□□□□□ -0.22
RNF13O43567 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.68□□□□□ -0.22
RNF13O43567 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
RNF13O43567 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RNF13O43567 INTS4P2-202ENST00000614726 2019 ntBASIC13.68□□□□□ -0.22
RNF13O43567 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms