Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC10.31□□□□□ -0.76
NDUFA1O15239 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC10.31□□□□□ -0.76
NDUFA1O15239 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC10.31□□□□□ -0.76
NDUFA1O15239 AC105339.1-204ENST00000636249 355 ntBASIC10.31□□□□□ -0.76
NDUFA1O15239 GRN-214ENST00000589265 1632 ntTSL 5 BASIC10.31□□□□□ -0.76
NDUFA1O15239 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC10.31□□□□□ -0.76
NDUFA1O15239 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
NDUFA1O15239 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 AL591122.2-201ENST00000624125 1853 ntBASIC10.31□□□□□ -0.76
NDUFA1O15239 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
NDUFA1O15239 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC10.31□□□□□ -0.76
NDUFA1O15239 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC10.31□□□□□ -0.76
NDUFA1O15239 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC10.31□□□□□ -0.76
NDUFA1O15239 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC10.31□□□□□ -0.76
NDUFA1O15239 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC10.31□□□□□ -0.76
NDUFA1O15239 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 MVK-214ENST00000629016 1591 ntTSL 5 BASIC10.31□□□□□ -0.76
NDUFA1O15239 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
NDUFA1O15239 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
NDUFA1O15239 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
NDUFA1O15239 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
NDUFA1O15239 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC10.3□□□□□ -0.76
NDUFA1O15239 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC10.3□□□□□ -0.76
NDUFA1O15239 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
NDUFA1O15239 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
NDUFA1O15239 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC10.3□□□□□ -0.76
NDUFA1O15239 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 AL022342.1-201ENST00000400363 863 ntBASIC10.3□□□□□ -0.76
NDUFA1O15239 AL627223.1-201ENST00000416693 442 ntBASIC10.3□□□□□ -0.76
NDUFA1O15239 AC004945.1-201ENST00000416738 983 ntBASIC10.3□□□□□ -0.76
NDUFA1O15239 SPDYE7P-202ENST00000420373 878 ntBASIC10.3□□□□□ -0.76
NDUFA1O15239 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 RBPMS2P1-201ENST00000437762 623 ntBASIC10.3□□□□□ -0.76
NDUFA1O15239 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC10.3□□□□□ -0.76
NDUFA1O15239 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC10.3□□□□□ -0.76
NDUFA1O15239 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC10.3□□□□□ -0.76
NDUFA1O15239 AP000344.2-201ENST00000512987 629 ntBASIC10.3□□□□□ -0.76
NDUFA1O15239 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC10.3□□□□□ -0.76
NDUFA1O15239 MIR3687-2-201ENST00000577708 61 ntBASIC10.3□□□□□ -0.76
NDUFA1O15239 PRR29-209ENST00000582540 967 ntTSL 2 BASIC10.3□□□□□ -0.76
NDUFA1O15239 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC10.3□□□□□ -0.76
NDUFA1O15239 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC10.3□□□□□ -0.76
NDUFA1O15239 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC10.3□□□□□ -0.76
NDUFA1O15239 MIR3687-1-201ENST00000614492 61 ntBASIC10.3□□□□□ -0.76
NDUFA1O15239 AC007967.4-201ENST00000614700 386 ntBASIC10.3□□□□□ -0.76
NDUFA1O15239 MIR6069-201ENST00000620069 79 ntBASIC10.3□□□□□ -0.76
NDUFA1O15239 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
NDUFA1O15239 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
NDUFA1O15239 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
NDUFA1O15239 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
NDUFA1O15239 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC10.3□□□□□ -0.76
NDUFA1O15239 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC10.3□□□□□ -0.76
NDUFA1O15239 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
NDUFA1O15239 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
NDUFA1O15239 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms