Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 DUX4L27-201ENST00000554796 1261 ntBASIC14.16□□□□□ -0.14
CLIC1O00299 BX539320.1-201ENST00000623759 877 ntBASIC14.16□□□□□ -0.14
CLIC1O00299 PRSS30P-206ENST00000641773 873 ntBASIC14.16□□□□□ -0.14
CLIC1O00299 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CLIC1O00299 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLIC1O00299 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CLIC1O00299 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLIC1O00299 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.16□□□□□ -0.14
CLIC1O00299 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLIC1O00299 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLIC1O00299 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLIC1O00299 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CLIC1O00299 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLIC1O00299 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLIC1O00299 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLIC1O00299 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLIC1O00299 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLIC1O00299 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.16□□□□□ -0.14
CLIC1O00299 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CLIC1O00299 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CLIC1O00299 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CLIC1O00299 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLIC1O00299 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLIC1O00299 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
CLIC1O00299 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.15□□□□□ -0.14
CLIC1O00299 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.15□□□□□ -0.14
CLIC1O00299 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.15□□□□□ -0.14
CLIC1O00299 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CLIC1O00299 AC022144.1-201ENST00000602255 1580 ntBASIC14.15□□□□□ -0.14
CLIC1O00299 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.15□□□□□ -0.14
CLIC1O00299 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.15□□□□□ -0.14
CLIC1O00299 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CLIC1O00299 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.15□□□□□ -0.14
CLIC1O00299 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.15□□□□□ -0.14
CLIC1O00299 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.15□□□□□ -0.14
CLIC1O00299 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.15□□□□□ -0.14
CLIC1O00299 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.15□□□□□ -0.14
CLIC1O00299 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.15□□□□□ -0.14
CLIC1O00299 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.15□□□□□ -0.14
CLIC1O00299 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
CLIC1O00299 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.15□□□□□ -0.14
CLIC1O00299 DUX4L47-201ENST00000566374 394 ntBASIC14.15□□□□□ -0.14
CLIC1O00299 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.15□□□□□ -0.14
CLIC1O00299 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.15□□□□□ -0.14
CLIC1O00299 AL390754.1-201ENST00000619088 582 ntBASIC14.15□□□□□ -0.14
CLIC1O00299 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.15□□□□□ -0.14
CLIC1O00299 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CLIC1O00299 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 MST1P2-201ENST00000457982 2291 ntBASIC14.15□□□□□ -0.14
CLIC1O00299 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLIC1O00299 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
CLIC1O00299 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.14□□□□□ -0.15
CLIC1O00299 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLIC1O00299 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLIC1O00299 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLIC1O00299 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLIC1O00299 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CLIC1O00299 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLIC1O00299 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLIC1O00299 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.14□□□□□ -0.15
CLIC1O00299 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CLIC1O00299 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLIC1O00299 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CLIC1O00299 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLIC1O00299 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLIC1O00299 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLIC1O00299 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLIC1O00299 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLIC1O00299 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLIC1O00299 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.14□□□□□ -0.15
CLIC1O00299 AL139094.1-201ENST00000405549 1188 ntBASIC14.14□□□□□ -0.15
CLIC1O00299 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms