Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 RNA5SP415-201ENST00000517246 115 ntBASIC10.53□□□□□ -0.72
LINC01546A6NGU7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 SORD2P-201ENST00000558556 1069 ntBASIC10.53□□□□□ -0.72
LINC01546A6NGU7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC10.53□□□□□ -0.72
LINC01546A6NGU7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 AC025048.3-201ENST00000590609 569 ntBASIC10.53□□□□□ -0.72
LINC01546A6NGU7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 BAP1-211ENST00000615113 489 ntBASIC10.53□□□□□ -0.72
LINC01546A6NGU7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 AC005702.4-201ENST00000618393 416 ntBASIC10.53□□□□□ -0.72
LINC01546A6NGU7 AF228730.6-201ENST00000641497 218 ntBASIC10.53□□□□□ -0.72
LINC01546A6NGU7 AC084121.3-201ENST00000641716 218 ntBASIC10.53□□□□□ -0.72
LINC01546A6NGU7 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
LINC01546A6NGU7 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC10.52□□□□□ -0.72
LINC01546A6NGU7 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC01546A6NGU7 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC01546A6NGU7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LINC01546A6NGU7 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
LINC01546A6NGU7 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
LINC01546A6NGU7 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC10.52□□□□□ -0.72
LINC01546A6NGU7 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
LINC01546A6NGU7 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC10.52□□□□□ -0.72
LINC01546A6NGU7 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC10.52□□□□□ -0.72
LINC01546A6NGU7 AC087386.2-201ENST00000623212 4637 ntBASIC10.52□□□□□ -0.72
LINC01546A6NGU7 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
LINC01546A6NGU7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 CICP1-201ENST00000416803 2410 ntBASIC10.52□□□□□ -0.73
LINC01546A6NGU7 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 YBX2P1-201ENST00000394192 760 ntBASIC10.52□□□□□ -0.73
LINC01546A6NGU7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 SUN1-204ENST00000403868 978 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 ADH5P3-201ENST00000433842 1137 ntBASIC10.52□□□□□ -0.73
LINC01546A6NGU7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC10.52□□□□□ -0.73
LINC01546A6NGU7 DUX4L47-201ENST00000566374 394 ntBASIC10.52□□□□□ -0.73
LINC01546A6NGU7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC10.52□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms