Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC21.73■■□□□ 1.07
HFM1A2PYH4 DRG2-220ENST00000583355 891 ntTSL 3 BASIC21.73■■□□□ 1.07
HFM1A2PYH4 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC21.73■■□□□ 1.07
HFM1A2PYH4 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
HFM1A2PYH4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HFM1A2PYH4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
HFM1A2PYH4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HFM1A2PYH4 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HFM1A2PYH4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HFM1A2PYH4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
HFM1A2PYH4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HFM1A2PYH4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HFM1A2PYH4 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HFM1A2PYH4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC21.73■■□□□ 1.07
HFM1A2PYH4 AC140479.7-201ENST00000636301 2332 ntBASIC21.73■■□□□ 1.07
HFM1A2PYH4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HFM1A2PYH4 RAN-210ENST00000541630 1475 ntTSL 2 BASIC21.73■■□□□ 1.07
HFM1A2PYH4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
HFM1A2PYH4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HFM1A2PYH4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HFM1A2PYH4 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HFM1A2PYH4 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HFM1A2PYH4 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HFM1A2PYH4 CMC1-204ENST00000423894 549 ntTSL 2 BASIC21.72■■□□□ 1.07
HFM1A2PYH4 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HFM1A2PYH4 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC21.72■■□□□ 1.07
HFM1A2PYH4 NUP210P1-202ENST00000504322 710 ntBASIC21.72■■□□□ 1.07
HFM1A2PYH4 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC21.72■■□□□ 1.07
HFM1A2PYH4 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC21.72■■□□□ 1.07
HFM1A2PYH4 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC21.72■■□□□ 1.07
HFM1A2PYH4 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HFM1A2PYH4 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC21.72■■□□□ 1.07
HFM1A2PYH4 AC124068.2-201ENST00000569473 1109 ntBASIC21.72■■□□□ 1.07
HFM1A2PYH4 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC21.72■■□□□ 1.07
HFM1A2PYH4 AC097724.1-201ENST00000609581 426 ntBASIC21.72■■□□□ 1.07
HFM1A2PYH4 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC21.72■■□□□ 1.07
HFM1A2PYH4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC21.72■■□□□ 1.07
HFM1A2PYH4 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC21.72■■□□□ 1.07
HFM1A2PYH4 AC090505.1-201ENST00000430515 1834 ntBASIC21.72■■□□□ 1.07
HFM1A2PYH4 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HFM1A2PYH4 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HFM1A2PYH4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
HFM1A2PYH4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HFM1A2PYH4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HFM1A2PYH4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC21.72■■□□□ 1.07
HFM1A2PYH4 AL157791.1-201ENST00000553667 1699 ntBASIC21.72■■□□□ 1.07
HFM1A2PYH4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
HFM1A2PYH4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HFM1A2PYH4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HFM1A2PYH4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
HFM1A2PYH4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HFM1A2PYH4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
HFM1A2PYH4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC21.72■■□□□ 1.07
HFM1A2PYH4 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC21.72■■□□□ 1.07
HFM1A2PYH4 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC21.72■■□□□ 1.07
HFM1A2PYH4 MSRA-203ENST00000441698 788 ntTSL 2 BASIC21.72■■□□□ 1.07
HFM1A2PYH4 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC21.72■■□□□ 1.07
HFM1A2PYH4 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HFM1A2PYH4 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC21.72■■□□□ 1.07
HFM1A2PYH4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
HFM1A2PYH4 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HFM1A2PYH4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HFM1A2PYH4 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC21.71■■□□□ 1.07
HFM1A2PYH4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
HFM1A2PYH4 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC21.71■■□□□ 1.07
HFM1A2PYH4 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
HFM1A2PYH4 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
HFM1A2PYH4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HFM1A2PYH4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HFM1A2PYH4 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HFM1A2PYH4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
HFM1A2PYH4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HFM1A2PYH4 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC21.71■■□□□ 1.07
HFM1A2PYH4 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HFM1A2PYH4 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC21.71■■□□□ 1.07
HFM1A2PYH4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HFM1A2PYH4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HFM1A2PYH4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
HFM1A2PYH4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HFM1A2PYH4 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
HFM1A2PYH4 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HFM1A2PYH4 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC21.71■■□□□ 1.07
HFM1A2PYH4 AL662890.1-201ENST00000396818 632 ntBASIC21.71■■□□□ 1.07
HFM1A2PYH4 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC21.71■■□□□ 1.07
HFM1A2PYH4 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC21.71■■□□□ 1.07
HFM1A2PYH4 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC21.71■■□□□ 1.07
HFM1A2PYH4 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC21.71■■□□□ 1.07
HFM1A2PYH4 AC073150.1-201ENST00000450406 1084 ntBASIC21.71■■□□□ 1.07
HFM1A2PYH4 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
HFM1A2PYH4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
HFM1A2PYH4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC21.71■■□□□ 1.07
HFM1A2PYH4 MIR3188-201ENST00000583494 85 ntBASIC21.71■■□□□ 1.07
HFM1A2PYH4 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
HFM1A2PYH4 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC21.71■■□□□ 1.07
HFM1A2PYH4 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC21.71■■□□□ 1.07
HFM1A2PYH4 AC090386.2-201ENST00000623010 1039 ntBASIC21.71■■□□□ 1.07
HFM1A2PYH4 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC21.71■■□□□ 1.07
HFM1A2PYH4 NAP1L6-202ENST00000641404 1222 ntBASIC21.71■■□□□ 1.07
HFM1A2PYH4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HFM1A2PYH4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms