Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 AC004945.1-201ENST00000416738 983 ntBASIC13.05□□□□□ -0.32
SHISA3A0PJX4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 MCCD1P2-201ENST00000423228 335 ntBASIC13.05□□□□□ -0.32
SHISA3A0PJX4 AC005237.2-201ENST00000434368 219 ntBASIC13.05□□□□□ -0.32
SHISA3A0PJX4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 ACTG1P14-201ENST00000446382 1122 ntBASIC13.05□□□□□ -0.32
SHISA3A0PJX4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 AC017007.3-201ENST00000479865 435 ntBASIC13.05□□□□□ -0.32
SHISA3A0PJX4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 KRT18P58-201ENST00000527480 1120 ntBASIC13.05□□□□□ -0.32
SHISA3A0PJX4 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 AL512361.1-201ENST00000554200 418 ntBASIC13.05□□□□□ -0.32
SHISA3A0PJX4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.05□□□□□ -0.32
SHISA3A0PJX4 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 RBPMS2P1-201ENST00000437762 623 ntBASIC13.04□□□□□ -0.32
SHISA3A0PJX4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 MIR4453-201ENST00000584019 89 ntBASIC13.04□□□□□ -0.32
SHISA3A0PJX4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 AL589739.1-201ENST00000607720 493 ntBASIC13.04□□□□□ -0.32
SHISA3A0PJX4 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SHISA3A0PJX4 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms