Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 CICP11-201ENST00000434745 2827 ntBASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX49Q9Y6V7 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 TKT-201ENST00000296289 1931 ntTSL 5 BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 BEND3P1-201ENST00000421591 1944 ntBASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 ANKRD19P-201ENST00000338192 862 ntBASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 AC004987.2-201ENST00000395959 1148 ntBASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 AC022210.1-201ENST00000449856 793 ntBASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 RAB43P1-201ENST00000561790 589 ntBASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 AL450472.2-201ENST00000603663 1156 ntBASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 AC017083.2-201ENST00000608069 979 ntBASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 MIR6752-201ENST00000618442 71 ntBASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDX49Q9Y6V7 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 AL137784.3-201ENST00000623858 2288 ntBASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 MEP1AP4-201ENST00000423244 1087 ntBASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 HLA-V-201ENST00000429037 534 ntBASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 EEF1DP4-201ENST00000446006 880 ntBASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 AC092552.1-201ENST00000547243 906 ntBASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 AL033527.5-201ENST00000641382 801 ntBASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 SRC-202ENST00000373558 4304 ntTSL 5 BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX49Q9Y6V7 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
DDX49Q9Y6V7 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DDX49Q9Y6V7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
DDX49Q9Y6V7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
DDX49Q9Y6V7 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DDX49Q9Y6V7 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms