Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 PPY2P-201ENST00000582808 702 ntBASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 AL359258.3-201ENST00000622910 2331 ntBASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 AC112693.3-201ENST00000624819 1983 ntBASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 KRT8P19-201ENST00000551916 1455 ntBASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 NORAD-201ENST00000565493 5339 ntBASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PCDHGA9Q9Y5G4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 AC016700.1-201ENST00000429424 312 ntBASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 AC091812.3-201ENST00000621362 345 ntBASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 AC139749.1-202ENST00000617529 3139 ntBASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 AC091951.1-201ENST00000512854 2465 ntBASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 AL158070.2-201ENST00000623713 1621 ntBASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
PCDHGA9Q9Y5G4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 AC022616.1-201ENST00000518688 554 ntBASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 CU633904.3-201ENST00000624042 1029 ntBASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCDHGA9Q9Y5G4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms