Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 RHOQP1-201ENST00000555758 579 ntBASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 OR2I1P-210ENST00000642037 4691 ntBASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHB1Q9Y5F3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 ACTBP8-201ENST00000403258 1108 ntBASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 AC022137.2-201ENST00000503482 481 ntBASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHB1Q9Y5F3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 LRRC59-203ENST00000576448 1531 ntBASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 CNN2P8-201ENST00000421872 913 ntBASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 AC104306.2-201ENST00000451877 341 ntBASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 IGHJ2P-201ENST00000454480 60 ntBASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 AP001258.2-201ENST00000529891 490 ntBASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 AC023310.1-201ENST00000554836 735 ntBASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 AL022328.3-201ENST00000607943 679 ntBASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 AL021578.1-201ENST00000613646 709 ntBASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHB1Q9Y5F3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms