Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 GOLGA2P4-201ENST00000441462 777 ntBASIC14.98□□□□□ -0.01
SPASTQ9UBP0 HOMER2P2-201ENST00000451621 847 ntBASIC14.98□□□□□ -0.01
SPASTQ9UBP0 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 AL022328.3-201ENST00000607943 679 ntBASIC14.98□□□□□ -0.01
SPASTQ9UBP0 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.98□□□□□ -0.01
SPASTQ9UBP0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 AC112693.3-201ENST00000624819 1983 ntBASIC14.97□□□□□ -0.01
SPASTQ9UBP0 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 AC006033.1-201ENST00000440505 426 ntBASIC14.97□□□□□ -0.01
SPASTQ9UBP0 AC022616.1-201ENST00000518688 554 ntBASIC14.97□□□□□ -0.01
SPASTQ9UBP0 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 EEF1DP1-201ENST00000585891 896 ntBASIC14.97□□□□□ -0.01
SPASTQ9UBP0 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 AL118558.3-201ENST00000607414 1079 ntBASIC14.97□□□□□ -0.01
SPASTQ9UBP0 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.97□□□□□ -0.01
SPASTQ9UBP0 AL603764.1-201ENST00000636452 321 ntBASIC14.97□□□□□ -0.01
SPASTQ9UBP0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 AL009178.2-201ENST00000597278 2719 ntBASIC14.97□□□□□ -0.01
SPASTQ9UBP0 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPASTQ9UBP0 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.96□□□□□ -0.01
SPASTQ9UBP0 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms