Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 AC004945.1-201ENST00000416738 983 ntBASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 AC091804.1-201ENST00000486888 567 ntBASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 COX5BP1-201ENST00000507622 393 ntBASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 SAMD11P1-201ENST00000571429 661 ntBASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 C8orf49-201ENST00000525043 1968 ntBASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 AC005912.2-201ENST00000619492 2400 ntBASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HDAC6Q9UBN7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 AL390755.1-201ENST00000623716 2027 ntBASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 POM121L8P-201ENST00000417732 1281 ntBASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 POM121L9P-203ENST00000441984 1285 ntBASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 SCARNA20.5-201ENST00000516991 142 ntBASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 RHOQP1-201ENST00000555758 579 ntBASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HDAC6Q9UBN7 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.93■□□□□ 0.3
HDAC6Q9UBN7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms