Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 KRT8P24-201ENST00000560290 1559 ntBASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCM2LQ9NUG4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCM2LQ9NUG4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCM2LQ9NUG4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.33□□□□□ -0.11
CCM2LQ9NUG4 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCM2LQ9NUG4 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCM2LQ9NUG4 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCM2LQ9NUG4 KRT8P22-201ENST00000562317 1415 ntBASIC14.33□□□□□ -0.11
CCM2LQ9NUG4 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCM2LQ9NUG4 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
CCM2LQ9NUG4 AC099521.3-201ENST00000624251 2938 ntBASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 U91328.1-201ENST00000437528 223 ntBASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 AC027612.1-201ENST00000445234 2395 ntBASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CCM2LQ9NUG4 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 HILS1-202ENST00000545329 423 ntBASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCM2LQ9NUG4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms