Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LRTM1Q9HBL6 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 C1QBPP1-201ENST00000400117 770 ntBASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 AC093004.1-201ENST00000508850 424 ntBASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 AC022616.1-201ENST00000518688 554 ntBASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 AC055876.2-201ENST00000531834 546 ntBASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 DUX4L47-201ENST00000566374 394 ntBASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 AC239800.4-201ENST00000603712 296 ntBASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 AC006504.5-208ENST00000588784 2401 ntBASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.45□□□□□ -0.1
LRTM1Q9HBL6 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 AP001582.1-201ENST00000525856 295 ntBASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 AC099568.2-201ENST00000609194 695 ntBASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 MIR8072-201ENST00000614241 80 ntBASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 AGGF1P1-201ENST00000509500 2073 ntBASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRTM1Q9HBL6 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms