Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 AL603832.2-201ENST00000566195 2125 ntBASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 ALG1L6P-201ENST00000515248 758 ntBASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 MIR4313-201ENST00000580760 101 ntBASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.48■□□□□ 0.23
UBE2OQ9C0C9 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 AC026320.2-201ENST00000434379 478 ntBASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 AC012158.2-201ENST00000536546 354 ntBASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 AL109837.1-201ENST00000603272 613 ntBASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 AC092299.1-201ENST00000632679 757 ntBASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 AC112504.1-201ENST00000623415 1841 ntBASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
UBE2OQ9C0C9 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 FAM58BP-201ENST00000439056 645 ntBASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 HLA-J-204ENST00000495278 958 ntBASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 FAM86KP-201ENST00000509817 987 ntBASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
UBE2OQ9C0C9 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms