Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDH11YQ9BZA8 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH11YQ9BZA8 PIN4P1-201ENST00000451079 396 ntBASIC19.09■□□□□ 0.65
PCDH11YQ9BZA8 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDH11YQ9BZA8 KRT18P66-201ENST00000452970 1269 ntBASIC19.09■□□□□ 0.65
PCDH11YQ9BZA8 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH11YQ9BZA8 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDH11YQ9BZA8 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDH11YQ9BZA8 AC124068.2-201ENST00000569473 1109 ntBASIC19.09■□□□□ 0.65
PCDH11YQ9BZA8 DRG2-220ENST00000583355 891 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDH11YQ9BZA8 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDH11YQ9BZA8 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PCDH11YQ9BZA8 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH11YQ9BZA8 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH11YQ9BZA8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDH11YQ9BZA8 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH11YQ9BZA8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH11YQ9BZA8 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDH11YQ9BZA8 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH11YQ9BZA8 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 HLA-DQB1-202ENST00000399079 1501 ntBASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 HIST2H2BA-201ENST00000412169 381 ntBASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 ST13P19-201ENST00000442505 1124 ntBASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 LYPLA2P1-203ENST00000447689 696 ntBASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 MIR6756-201ENST00000616240 63 ntBASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDH11YQ9BZA8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH11YQ9BZA8 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PCDH11YQ9BZA8 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH11YQ9BZA8 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PCDH11YQ9BZA8 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH11YQ9BZA8 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH11YQ9BZA8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
PCDH11YQ9BZA8 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
PCDH11YQ9BZA8 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDH11YQ9BZA8 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PCDH11YQ9BZA8 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH11YQ9BZA8 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH11YQ9BZA8 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH11YQ9BZA8 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH11YQ9BZA8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH11YQ9BZA8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH11YQ9BZA8 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDH11YQ9BZA8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH11YQ9BZA8 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 MT3-203ENST00000565838 421 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 AL132780.4-201ENST00000624870 1135 ntBASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH11YQ9BZA8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms