Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
VAMP8Q9BV40 LINC00638-201ENST00000555578 2518 ntBASIC10.91□□□□□ -0.66
VAMP8Q9BV40 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
VAMP8Q9BV40 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC10.91□□□□□ -0.66
VAMP8Q9BV40 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VAMP8Q9BV40 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC10.91□□□□□ -0.66
VAMP8Q9BV40 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VAMP8Q9BV40 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VAMP8Q9BV40 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 AP3S2-216ENST00000617003 1561 ntBASIC10.9□□□□□ -0.66
VAMP8Q9BV40 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 CD9-202ENST00000382515 1229 ntTSL 5 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 NEK4P2-201ENST00000580004 1012 ntBASIC10.9□□□□□ -0.66
VAMP8Q9BV40 NT5C-210ENST00000582160 860 ntTSL 2 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 AC090643.2-201ENST00000623442 2029 ntBASIC10.9□□□□□ -0.66
VAMP8Q9BV40 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 AC148477.5-201ENST00000625164 1645 ntBASIC10.9□□□□□ -0.66
VAMP8Q9BV40 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 HERC2P10-201ENST00000570209 2393 ntBASIC10.9□□□□□ -0.66
VAMP8Q9BV40 AC124319.4-201ENST00000622931 2161 ntBASIC10.9□□□□□ -0.66
VAMP8Q9BV40 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VAMP8Q9BV40 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
VAMP8Q9BV40 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.67
VAMP8Q9BV40 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
VAMP8Q9BV40 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
VAMP8Q9BV40 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
VAMP8Q9BV40 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
VAMP8Q9BV40 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
VAMP8Q9BV40 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC10.89□□□□□ -0.67
VAMP8Q9BV40 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VAMP8Q9BV40 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC10.89□□□□□ -0.67
VAMP8Q9BV40 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
VAMP8Q9BV40 AC092139.4-201ENST00000624318 2794 ntBASIC10.89□□□□□ -0.67
VAMP8Q9BV40 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC10.89□□□□□ -0.67
VAMP8Q9BV40 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VAMP8Q9BV40 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
VAMP8Q9BV40 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC10.89□□□□□ -0.67
VAMP8Q9BV40 AC126564.1-201ENST00000623628 2013 ntBASIC10.89□□□□□ -0.67
VAMP8Q9BV40 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
VAMP8Q9BV40 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC10.89□□□□□ -0.67
VAMP8Q9BV40 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
VAMP8Q9BV40 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
VAMP8Q9BV40 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
VAMP8Q9BV40 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC10.89□□□□□ -0.67
VAMP8Q9BV40 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VAMP8Q9BV40 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC10.89□□□□□ -0.67
VAMP8Q9BV40 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
VAMP8Q9BV40 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
VAMP8Q9BV40 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VAMP8Q9BV40 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
VAMP8Q9BV40 SLC29A4P1-201ENST00000398760 971 ntBASIC10.89□□□□□ -0.67
VAMP8Q9BV40 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC10.89□□□□□ -0.67
VAMP8Q9BV40 AL020989.1-201ENST00000422979 469 ntBASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms