Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 AL390955.2-201ENST00000603032 514 ntBASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 AC008738.7-201ENST00000609744 511 ntBASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 BTBD7P1-201ENST00000447253 1453 ntBASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 AC022144.1-201ENST00000602255 1580 ntBASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHRDL1Q9BU40 AC140479.7-201ENST00000636301 2332 ntBASIC12□□□□□ -0.49
CHRDL1Q9BU40 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CHRDL1Q9BU40 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHRDL1Q9BU40 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CHRDL1Q9BU40 AC006504.5-208ENST00000588784 2401 ntBASIC12□□□□□ -0.49
CHRDL1Q9BU40 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHRDL1Q9BU40 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
CHRDL1Q9BU40 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12□□□□□ -0.49
CHRDL1Q9BU40 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12□□□□□ -0.49
CHRDL1Q9BU40 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHRDL1Q9BU40 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12□□□□□ -0.49
CHRDL1Q9BU40 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CHRDL1Q9BU40 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 AL589987.1-201ENST00000453380 819 ntBASIC12□□□□□ -0.49
CHRDL1Q9BU40 AL512638.1-201ENST00000457493 794 ntBASIC12□□□□□ -0.49
CHRDL1Q9BU40 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 AC004890.2-204ENST00000481968 304 ntBASIC12□□□□□ -0.49
CHRDL1Q9BU40 SPDYE18-201ENST00000510091 1050 ntBASIC12□□□□□ -0.49
CHRDL1Q9BU40 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 AC135586.1-201ENST00000539323 574 ntBASIC12□□□□□ -0.49
CHRDL1Q9BU40 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 AC092337.1-201ENST00000568699 1129 ntBASIC12□□□□□ -0.49
CHRDL1Q9BU40 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12□□□□□ -0.49
CHRDL1Q9BU40 AC004840.1-201ENST00000636359 365 ntBASIC12□□□□□ -0.49
CHRDL1Q9BU40 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHRDL1Q9BU40 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHRDL1Q9BU40 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHRDL1Q9BU40 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CHRDL1Q9BU40 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12□□□□□ -0.49
CHRDL1Q9BU40 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CHRDL1Q9BU40 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHRDL1Q9BU40 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms