Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NICN1Q9BSH3 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.92□□□□□ -0.34
NICN1Q9BSH3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
NICN1Q9BSH3 AC023090.2-201ENST00000625182 2110 ntBASIC12.92□□□□□ -0.34
NICN1Q9BSH3 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NICN1Q9BSH3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
NICN1Q9BSH3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
NICN1Q9BSH3 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.92□□□□□ -0.34
NICN1Q9BSH3 AC018665.1-201ENST00000622927 1362 ntBASIC12.92□□□□□ -0.34
NICN1Q9BSH3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NICN1Q9BSH3 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.92□□□□□ -0.34
NICN1Q9BSH3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NICN1Q9BSH3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.92□□□□□ -0.34
NICN1Q9BSH3 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.92□□□□□ -0.34
NICN1Q9BSH3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NICN1Q9BSH3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.92□□□□□ -0.34
NICN1Q9BSH3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.92□□□□□ -0.34
NICN1Q9BSH3 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NICN1Q9BSH3 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NICN1Q9BSH3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.92□□□□□ -0.34
NICN1Q9BSH3 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NICN1Q9BSH3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 HLA-V-204ENST00000476601 1289 ntBASIC12.91□□□□□ -0.34
NICN1Q9BSH3 AC112482.1-201ENST00000492080 688 ntBASIC12.91□□□□□ -0.34
NICN1Q9BSH3 AC004066.1-201ENST00000502488 802 ntBASIC12.91□□□□□ -0.34
NICN1Q9BSH3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 AC011474.4-201ENST00000623523 2076 ntBASIC12.91□□□□□ -0.34
NICN1Q9BSH3 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 AL137783.1-201ENST00000623494 1896 ntBASIC12.91□□□□□ -0.34
NICN1Q9BSH3 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NICN1Q9BSH3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NICN1Q9BSH3 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
NICN1Q9BSH3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.9□□□□□ -0.34
NICN1Q9BSH3 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
NICN1Q9BSH3 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NICN1Q9BSH3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.9□□□□□ -0.34
NICN1Q9BSH3 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NICN1Q9BSH3 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NICN1Q9BSH3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.9□□□□□ -0.34
NICN1Q9BSH3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NICN1Q9BSH3 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NICN1Q9BSH3 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NICN1Q9BSH3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
NICN1Q9BSH3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.9□□□□□ -0.34
NICN1Q9BSH3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.9□□□□□ -0.34
NICN1Q9BSH3 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.9□□□□□ -0.34
NICN1Q9BSH3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.9□□□□□ -0.34
NICN1Q9BSH3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.9□□□□□ -0.34
NICN1Q9BSH3 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NICN1Q9BSH3 MST1P2-201ENST00000457982 2291 ntBASIC12.9□□□□□ -0.34
NICN1Q9BSH3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.9□□□□□ -0.34
NICN1Q9BSH3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NICN1Q9BSH3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms