Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
FGD4Q96M96 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FGD4Q96M96 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.88■□□□□ 0.29
FGD4Q96M96 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FGD4Q96M96 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FGD4Q96M96 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.88■□□□□ 0.29
FGD4Q96M96 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FGD4Q96M96 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
FGD4Q96M96 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.88■□□□□ 0.29
FGD4Q96M96 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FGD4Q96M96 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FGD4Q96M96 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FGD4Q96M96 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FGD4Q96M96 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FGD4Q96M96 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FGD4Q96M96 FAM58BP-201ENST00000439056 645 ntBASIC16.88■□□□□ 0.29
FGD4Q96M96 EEF1DP6-201ENST00000449232 372 ntBASIC16.88■□□□□ 0.29
FGD4Q96M96 AC073150.1-201ENST00000450406 1084 ntBASIC16.88■□□□□ 0.29
FGD4Q96M96 CEP164P1-201ENST00000455142 418 ntBASIC16.88■□□□□ 0.29
FGD4Q96M96 RPS2P36-201ENST00000456516 831 ntBASIC16.88■□□□□ 0.29
FGD4Q96M96 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.88■□□□□ 0.29
FGD4Q96M96 AC008805.1-201ENST00000590892 364 ntBASIC16.88■□□□□ 0.29
FGD4Q96M96 AC018635.2-201ENST00000608625 364 ntBASIC16.88■□□□□ 0.29
FGD4Q96M96 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.88■□□□□ 0.29
FGD4Q96M96 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.88■□□□□ 0.29
FGD4Q96M96 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.88■□□□□ 0.29
FGD4Q96M96 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FGD4Q96M96 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FGD4Q96M96 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FGD4Q96M96 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
FGD4Q96M96 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
FGD4Q96M96 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FGD4Q96M96 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
FGD4Q96M96 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
FGD4Q96M96 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FGD4Q96M96 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.88■□□□□ 0.29
FGD4Q96M96 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FGD4Q96M96 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FGD4Q96M96 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
FGD4Q96M96 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FGD4Q96M96 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FGD4Q96M96 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
FGD4Q96M96 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.87■□□□□ 0.29
FGD4Q96M96 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FGD4Q96M96 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FGD4Q96M96 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.87■□□□□ 0.29
FGD4Q96M96 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FGD4Q96M96 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.87■□□□□ 0.29
FGD4Q96M96 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.87■□□□□ 0.29
FGD4Q96M96 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FGD4Q96M96 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.87■□□□□ 0.29
FGD4Q96M96 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
FGD4Q96M96 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
FGD4Q96M96 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
FGD4Q96M96 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FGD4Q96M96 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.87■□□□□ 0.29
FGD4Q96M96 TLE1P1-201ENST00000422965 589 ntBASIC16.87■□□□□ 0.29
FGD4Q96M96 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.87■□□□□ 0.29
FGD4Q96M96 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FGD4Q96M96 AC012441.2-201ENST00000444843 739 ntBASIC16.87■□□□□ 0.29
FGD4Q96M96 CICP12-201ENST00000455801 843 ntBASIC16.87■□□□□ 0.29
FGD4Q96M96 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.87■□□□□ 0.29
FGD4Q96M96 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.87■□□□□ 0.29
FGD4Q96M96 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.87■□□□□ 0.29
FGD4Q96M96 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.87■□□□□ 0.29
FGD4Q96M96 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
FGD4Q96M96 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.87■□□□□ 0.29
FGD4Q96M96 BX088702.1-201ENST00000610784 235 ntBASIC16.87■□□□□ 0.29
FGD4Q96M96 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.87■□□□□ 0.29
FGD4Q96M96 AL136295.7-201ENST00000619226 1200 ntBASIC16.87■□□□□ 0.29
FGD4Q96M96 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FGD4Q96M96 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
FGD4Q96M96 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FGD4Q96M96 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.87■□□□□ 0.29
FGD4Q96M96 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.87■□□□□ 0.29
FGD4Q96M96 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FGD4Q96M96 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.87■□□□□ 0.29
FGD4Q96M96 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FGD4Q96M96 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
FGD4Q96M96 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
FGD4Q96M96 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
FGD4Q96M96 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FGD4Q96M96 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FGD4Q96M96 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FGD4Q96M96 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
FGD4Q96M96 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.86■□□□□ 0.29
FGD4Q96M96 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FGD4Q96M96 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
FGD4Q96M96 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FGD4Q96M96 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FGD4Q96M96 AC013726.1-201ENST00000563747 2285 ntBASIC16.86■□□□□ 0.29
FGD4Q96M96 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
FGD4Q96M96 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.86■□□□□ 0.29
FGD4Q96M96 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FGD4Q96M96 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
FGD4Q96M96 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FGD4Q96M96 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
FGD4Q96M96 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FGD4Q96M96 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.86■□□□□ 0.29
FGD4Q96M96 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms