Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 AC112693.3-201ENST00000624819 1983 ntBASIC17.53■□□□□ 0.4
TRIM47Q96LD4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 AL355334.1-201ENST00000417713 215 ntBASIC17.52■□□□□ 0.4
TRIM47Q96LD4 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 CHMP1AP1-201ENST00000445563 662 ntBASIC17.52■□□□□ 0.4
TRIM47Q96LD4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 AL391280.1-201ENST00000506969 1062 ntBASIC17.52■□□□□ 0.4
TRIM47Q96LD4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 AC025181.2-201ENST00000606994 802 ntBASIC17.52■□□□□ 0.4
TRIM47Q96LD4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM47Q96LD4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
TRIM47Q96LD4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM47Q96LD4 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM47Q96LD4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM47Q96LD4 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
TRIM47Q96LD4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM47Q96LD4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 PCDHA3-202ENST00000532566 4594 ntBASIC17.51■□□□□ 0.39
TRIM47Q96LD4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 POM121L8P-201ENST00000417732 1281 ntBASIC17.51■□□□□ 0.39
TRIM47Q96LD4 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 POM121L9P-203ENST00000441984 1285 ntBASIC17.51■□□□□ 0.39
TRIM47Q96LD4 AC021723.1-201ENST00000486306 515 ntBASIC17.51■□□□□ 0.39
TRIM47Q96LD4 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 AL161670.2-201ENST00000557650 1227 ntBASIC17.51■□□□□ 0.39
TRIM47Q96LD4 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 KRT8P29-201ENST00000420409 1371 ntBASIC17.51■□□□□ 0.39
TRIM47Q96LD4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM47Q96LD4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms