Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.53■□□□□ 0.08
IFT43Q96FT9 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IFT43Q96FT9 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
IFT43Q96FT9 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IFT43Q96FT9 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.53■□□□□ 0.08
IFT43Q96FT9 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.53■□□□□ 0.08
IFT43Q96FT9 CU634019.7-201ENST00000624153 1185 ntBASIC15.53■□□□□ 0.08
IFT43Q96FT9 FP236241.2-201ENST00000624906 1185 ntBASIC15.53■□□□□ 0.08
IFT43Q96FT9 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
IFT43Q96FT9 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
IFT43Q96FT9 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
IFT43Q96FT9 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.53■□□□□ 0.08
IFT43Q96FT9 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IFT43Q96FT9 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IFT43Q96FT9 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IFT43Q96FT9 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IFT43Q96FT9 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.53■□□□□ 0.08
IFT43Q96FT9 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IFT43Q96FT9 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
IFT43Q96FT9 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
IFT43Q96FT9 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
IFT43Q96FT9 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.52■□□□□ 0.08
IFT43Q96FT9 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.52■□□□□ 0.08
IFT43Q96FT9 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.52■□□□□ 0.08
IFT43Q96FT9 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.52■□□□□ 0.08
IFT43Q96FT9 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
IFT43Q96FT9 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
IFT43Q96FT9 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
IFT43Q96FT9 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
IFT43Q96FT9 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
IFT43Q96FT9 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
IFT43Q96FT9 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.52■□□□□ 0.08
IFT43Q96FT9 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.52■□□□□ 0.08
IFT43Q96FT9 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
IFT43Q96FT9 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
IFT43Q96FT9 REXO1L2P-201ENST00000425429 2069 ntBASIC15.52■□□□□ 0.08
IFT43Q96FT9 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
IFT43Q96FT9 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
IFT43Q96FT9 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
IFT43Q96FT9 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
IFT43Q96FT9 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
IFT43Q96FT9 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
IFT43Q96FT9 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.52■□□□□ 0.08
IFT43Q96FT9 SOCS2P1-201ENST00000417727 557 ntBASIC15.52■□□□□ 0.08
IFT43Q96FT9 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
IFT43Q96FT9 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.52■□□□□ 0.08
IFT43Q96FT9 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
IFT43Q96FT9 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.52■□□□□ 0.08
IFT43Q96FT9 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.52■□□□□ 0.08
IFT43Q96FT9 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.52■□□□□ 0.08
IFT43Q96FT9 AC133552.6-201ENST00000613406 534 ntBASIC15.52■□□□□ 0.08
IFT43Q96FT9 RPSAP52-203ENST00000622976 1023 ntBASIC15.52■□□□□ 0.08
IFT43Q96FT9 COX11-210ENST00000639671 696 ntBASIC15.52■□□□□ 0.08
IFT43Q96FT9 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
IFT43Q96FT9 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
IFT43Q96FT9 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
IFT43Q96FT9 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
IFT43Q96FT9 ZBED1P1-201ENST00000502364 1930 ntBASIC15.52■□□□□ 0.07
IFT43Q96FT9 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.52■□□□□ 0.07
IFT43Q96FT9 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.52■□□□□ 0.07
IFT43Q96FT9 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
IFT43Q96FT9 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.52■□□□□ 0.07
IFT43Q96FT9 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
IFT43Q96FT9 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
IFT43Q96FT9 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
IFT43Q96FT9 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.52■□□□□ 0.07
IFT43Q96FT9 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
IFT43Q96FT9 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.52■□□□□ 0.07
IFT43Q96FT9 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
IFT43Q96FT9 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
IFT43Q96FT9 USP31-203ENST00000567975 2142 ntTSL 2 BASIC15.52■□□□□ 0.07
IFT43Q96FT9 AP000845.1-201ENST00000581677 2131 ntBASIC15.52■□□□□ 0.07
IFT43Q96FT9 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.52■□□□□ 0.07
IFT43Q96FT9 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
IFT43Q96FT9 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
IFT43Q96FT9 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.52■□□□□ 0.07
IFT43Q96FT9 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IFT43Q96FT9 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IFT43Q96FT9 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IFT43Q96FT9 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IFT43Q96FT9 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IFT43Q96FT9 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
IFT43Q96FT9 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IFT43Q96FT9 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IFT43Q96FT9 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
IFT43Q96FT9 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.51■□□□□ 0.07
IFT43Q96FT9 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
IFT43Q96FT9 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IFT43Q96FT9 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IFT43Q96FT9 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IFT43Q96FT9 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
IFT43Q96FT9 AC007787.1-201ENST00000588095 1583 ntBASIC15.51■□□□□ 0.07
IFT43Q96FT9 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IFT43Q96FT9 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.51■□□□□ 0.07
IFT43Q96FT9 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IFT43Q96FT9 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.51■□□□□ 0.07
IFT43Q96FT9 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.51■□□□□ 0.07
IFT43Q96FT9 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.51■□□□□ 0.07
IFT43Q96FT9 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.51■□□□□ 0.07
IFT43Q96FT9 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms