Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC11.23□□□□□ -0.61
RNF183Q96D59 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC11.23□□□□□ -0.61
RNF183Q96D59 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
RNF183Q96D59 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
RNF183Q96D59 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
RNF183Q96D59 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
RNF183Q96D59 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
RNF183Q96D59 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
RNF183Q96D59 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
RNF183Q96D59 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC11.22□□□□□ -0.61
RNF183Q96D59 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 GZMB-202ENST00000382540 816 ntTSL 5 BASIC11.22□□□□□ -0.61
RNF183Q96D59 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 AC092933.1-201ENST00000393644 945 ntBASIC11.22□□□□□ -0.61
RNF183Q96D59 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC11.22□□□□□ -0.61
RNF183Q96D59 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
RNF183Q96D59 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC11.22□□□□□ -0.61
RNF183Q96D59 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC11.22□□□□□ -0.61
RNF183Q96D59 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC11.22□□□□□ -0.61
RNF183Q96D59 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 NUS1P3-201ENST00000423502 862 ntBASIC11.22□□□□□ -0.61
RNF183Q96D59 AC016694.1-201ENST00000434179 700 ntBASIC11.22□□□□□ -0.61
RNF183Q96D59 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC11.22□□□□□ -0.61
RNF183Q96D59 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 AC007551.1-201ENST00000457394 519 ntBASIC11.22□□□□□ -0.61
RNF183Q96D59 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC11.22□□□□□ -0.61
RNF183Q96D59 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC11.22□□□□□ -0.61
RNF183Q96D59 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC11.22□□□□□ -0.61
RNF183Q96D59 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
RNF183Q96D59 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC11.22□□□□□ -0.61
RNF183Q96D59 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC11.22□□□□□ -0.61
RNF183Q96D59 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
RNF183Q96D59 SNX29P1-201ENST00000548357 1007 ntBASIC11.22□□□□□ -0.61
RNF183Q96D59 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC11.22□□□□□ -0.61
RNF183Q96D59 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
RNF183Q96D59 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC11.22□□□□□ -0.61
RNF183Q96D59 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC11.22□□□□□ -0.61
RNF183Q96D59 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
RNF183Q96D59 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC11.22□□□□□ -0.61
RNF183Q96D59 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RNF183Q96D59 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC11.22□□□□□ -0.61
RNF183Q96D59 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
RNF183Q96D59 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
RNF183Q96D59 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
RNF183Q96D59 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC11.21□□□□□ -0.61
RNF183Q96D59 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RNF183Q96D59 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC11.21□□□□□ -0.61
RNF183Q96D59 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
RNF183Q96D59 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RNF183Q96D59 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC11.21□□□□□ -0.61
RNF183Q96D59 AC127383.1-201ENST00000444697 1800 ntBASIC11.21□□□□□ -0.61
RNF183Q96D59 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC11.21□□□□□ -0.61
RNF183Q96D59 TMBIM7P-203ENST00000641617 1718 ntBASIC11.21□□□□□ -0.61
RNF183Q96D59 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC11.21□□□□□ -0.61
RNF183Q96D59 LOX-206ENST00000639739 1626 ntTSL 5 BASIC11.21□□□□□ -0.61
RNF183Q96D59 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
RNF183Q96D59 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
RNF183Q96D59 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
RNF183Q96D59 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RNF183Q96D59 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RNF183Q96D59 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RNF183Q96D59 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RNF183Q96D59 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
RNF183Q96D59 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
RNF183Q96D59 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RNF183Q96D59 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
RNF183Q96D59 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
RNF183Q96D59 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
RNF183Q96D59 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC11.21□□□□□ -0.61
RNF183Q96D59 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms