Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS33AQ96AX1 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 AC022447.6-201ENST00000515522 438 ntBASIC14.46□□□□□ -0.09
VPS33AQ96AX1 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 AC004461.2-201ENST00000629517 803 ntBASIC14.46□□□□□ -0.09
VPS33AQ96AX1 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS33AQ96AX1 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VPS33AQ96AX1 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.46□□□□□ -0.1
VPS33AQ96AX1 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.46□□□□□ -0.1
VPS33AQ96AX1 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VPS33AQ96AX1 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
VPS33AQ96AX1 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
VPS33AQ96AX1 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VPS33AQ96AX1 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VPS33AQ96AX1 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 MST1P2-201ENST00000457982 2291 ntBASIC14.45□□□□□ -0.1
VPS33AQ96AX1 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.45□□□□□ -0.1
VPS33AQ96AX1 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 AC254562.1-201ENST00000417586 456 ntBASIC14.45□□□□□ -0.1
VPS33AQ96AX1 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 CNN2P11-201ENST00000429351 262 ntBASIC14.45□□□□□ -0.1
VPS33AQ96AX1 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 AC109322.1-201ENST00000524499 1264 ntBASIC14.45□□□□□ -0.1
VPS33AQ96AX1 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS33AQ96AX1 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms