Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PTP4A1Q93096 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PTP4A1Q93096 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTP4A1Q93096 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 AL589987.1-201ENST00000453380 819 ntBASIC13.51□□□□□ -0.25
PTP4A1Q93096 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 AC026410.3-201ENST00000514280 936 ntBASIC13.51□□□□□ -0.25
PTP4A1Q93096 AC022447.6-201ENST00000515522 438 ntBASIC13.51□□□□□ -0.25
PTP4A1Q93096 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 AC135586.1-201ENST00000539323 574 ntBASIC13.51□□□□□ -0.25
PTP4A1Q93096 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PTP4A1Q93096 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PTP4A1Q93096 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTP4A1Q93096 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTP4A1Q93096 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTP4A1Q93096 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTP4A1Q93096 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTP4A1Q93096 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PTP4A1Q93096 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PTP4A1Q93096 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PTP4A1Q93096 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PTP4A1Q93096 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PTP4A1Q93096 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PTP4A1Q93096 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PTP4A1Q93096 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PTP4A1Q93096 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PTP4A1Q93096 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PTP4A1Q93096 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PTP4A1Q93096 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PTP4A1Q93096 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PTP4A1Q93096 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 SRD5A3P1-201ENST00000603021 949 ntBASIC13.5□□□□□ -0.25
PTP4A1Q93096 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PTP4A1Q93096 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PTP4A1Q93096 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PTP4A1Q93096 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PTP4A1Q93096 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PTP4A1Q93096 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PTP4A1Q93096 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PTP4A1Q93096 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PTP4A1Q93096 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.5□□□□□ -0.25
PTP4A1Q93096 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
PTP4A1Q93096 MST1P2-201ENST00000457982 2291 ntBASIC13.5□□□□□ -0.25
PTP4A1Q93096 OR2I1P-209ENST00000641730 5365 ntBASIC13.49□□□□□ -0.25
PTP4A1Q93096 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PTP4A1Q93096 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PTP4A1Q93096 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.49□□□□□ -0.25
PTP4A1Q93096 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms