Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DDX1Q92499 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
DDX1Q92499 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DDX1Q92499 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DDX1Q92499 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
DDX1Q92499 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DDX1Q92499 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
DDX1Q92499 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.92■□□□□ 0.14
DDX1Q92499 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DDX1Q92499 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
DDX1Q92499 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.92■□□□□ 0.14
DDX1Q92499 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
DDX1Q92499 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.92■□□□□ 0.14
DDX1Q92499 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
DDX1Q92499 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
DDX1Q92499 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
DDX1Q92499 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
DDX1Q92499 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
DDX1Q92499 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.91■□□□□ 0.14
DDX1Q92499 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
DDX1Q92499 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.91■□□□□ 0.14
DDX1Q92499 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DDX1Q92499 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
DDX1Q92499 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.91■□□□□ 0.14
DDX1Q92499 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.91■□□□□ 0.14
DDX1Q92499 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DDX1Q92499 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
DDX1Q92499 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DDX1Q92499 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
DDX1Q92499 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.91■□□□□ 0.14
DDX1Q92499 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
DDX1Q92499 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DDX1Q92499 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
DDX1Q92499 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DDX1Q92499 MIR1247-201ENST00000408206 136 ntBASIC15.91■□□□□ 0.14
DDX1Q92499 CSF2RBP1-201ENST00000447905 391 ntBASIC15.91■□□□□ 0.14
DDX1Q92499 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.91■□□□□ 0.14
DDX1Q92499 KRT8P13-201ENST00000463294 1010 ntBASIC15.91■□□□□ 0.14
DDX1Q92499 AC108725.1-201ENST00000495472 409 ntBASIC15.91■□□□□ 0.14
DDX1Q92499 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.91■□□□□ 0.14
DDX1Q92499 RNA5SP423-201ENST00000517127 109 ntBASIC15.91■□□□□ 0.14
DDX1Q92499 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.91■□□□□ 0.14
DDX1Q92499 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.91■□□□□ 0.14
DDX1Q92499 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.91■□□□□ 0.14
DDX1Q92499 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
DDX1Q92499 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.91■□□□□ 0.14
DDX1Q92499 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.91■□□□□ 0.14
DDX1Q92499 ENPP7P14-201ENST00000621765 1040 ntBASIC15.91■□□□□ 0.14
DDX1Q92499 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.91■□□□□ 0.14
DDX1Q92499 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
DDX1Q92499 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
DDX1Q92499 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
DDX1Q92499 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.91■□□□□ 0.14
DDX1Q92499 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.91■□□□□ 0.14
DDX1Q92499 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.91■□□□□ 0.14
DDX1Q92499 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
DDX1Q92499 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
DDX1Q92499 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DDX1Q92499 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.9■□□□□ 0.14
DDX1Q92499 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DDX1Q92499 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DDX1Q92499 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
DDX1Q92499 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
DDX1Q92499 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.9■□□□□ 0.14
DDX1Q92499 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DDX1Q92499 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
DDX1Q92499 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DDX1Q92499 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DDX1Q92499 HSPA7-201ENST00000445535 1927 ntBASIC15.9■□□□□ 0.14
DDX1Q92499 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
DDX1Q92499 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.9■□□□□ 0.14
DDX1Q92499 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
DDX1Q92499 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.9■□□□□ 0.14
DDX1Q92499 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.9■□□□□ 0.14
DDX1Q92499 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.9■□□□□ 0.14
DDX1Q92499 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.9■□□□□ 0.14
DDX1Q92499 AC011840.2-201ENST00000563063 1520 ntBASIC15.9■□□□□ 0.14
DDX1Q92499 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DDX1Q92499 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DDX1Q92499 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
DDX1Q92499 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
DDX1Q92499 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
DDX1Q92499 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.9■□□□□ 0.14
DDX1Q92499 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
DDX1Q92499 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.9■□□□□ 0.14
DDX1Q92499 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC15.9■□□□□ 0.14
DDX1Q92499 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.9■□□□□ 0.14
DDX1Q92499 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.9■□□□□ 0.14
DDX1Q92499 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
DDX1Q92499 USP32P1-208ENST00000506594 1164 ntBASIC15.9■□□□□ 0.14
DDX1Q92499 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
DDX1Q92499 SLC25A47P1-201ENST00000531577 414 ntBASIC15.9■□□□□ 0.14
DDX1Q92499 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.9■□□□□ 0.14
DDX1Q92499 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.9■□□□□ 0.14
DDX1Q92499 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.9■□□□□ 0.14
DDX1Q92499 RN7SL48P-201ENST00000579283 293 ntBASIC15.9■□□□□ 0.14
DDX1Q92499 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
DDX1Q92499 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.9■□□□□ 0.14
DDX1Q92499 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.9■□□□□ 0.14
DDX1Q92499 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms