Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 BTBD7P1-201ENST00000447253 1453 ntBASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RTN4IP1Q8WWV3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 AL512638.1-201ENST00000457493 794 ntBASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 AC004890.2-204ENST00000481968 304 ntBASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 TIMM17BP1-201ENST00000545713 516 ntBASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 AC055811.4-201ENST00000624039 1754 ntBASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 AC022144.1-201ENST00000602255 1580 ntBASIC12.69□□□□□ -0.38
RTN4IP1Q8WWV3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 AL133267.1-201ENST00000398220 340 ntBASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 TOMM22P5-201ENST00000416399 439 ntBASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 AC114501.2-201ENST00000439631 535 ntBASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.68□□□□□ -0.38
RTN4IP1Q8WWV3 CYMP-203ENST00000474680 1263 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms