Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 AC018665.1-201ENST00000622927 1362 ntBASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRAF3IP1Q8TDR0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 AC005912.2-201ENST00000619492 2400 ntBASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 FAM207CP-201ENST00000443486 507 ntBASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 AC124283.3-201ENST00000570869 594 ntBASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 KRT8P14-201ENST00000414254 1442 ntBASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAF3IP1Q8TDR0 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 AC026748.1-201ENST00000624349 3251 ntBASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 AC023090.2-201ENST00000625182 2110 ntBASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRAF3IP1Q8TDR0 LINC02560-201ENST00000596379 459 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms