Protein–RNA interactions for Protein: Q8TCU5

GRIN3A, Glutamate receptor ionotropic, NMDA 3A, humanhuman

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3AQ8TCU5 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 AL583810.1-201ENST00000553344 1045 ntBASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 AC023310.1-201ENST00000554836 735 ntBASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 AC008687.7-202ENST00000637404 953 ntBASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 AC091951.1-201ENST00000512854 2465 ntBASIC15.32■□□□□ 0.04
GRIN3AQ8TCU5 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 AC007191.1-201ENST00000623179 2995 ntBASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 AC005840.4-201ENST00000541242 2494 ntBASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 RNA5SP412-201ENST00000516234 123 ntBASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 AC006453.4-201ENST00000636949 1252 ntBASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 WASH3P-207ENST00000560956 1394 ntBASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GRIN3AQ8TCU5 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GRIN3AQ8TCU5 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
GRIN3AQ8TCU5 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
GRIN3AQ8TCU5 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GRIN3AQ8TCU5 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GRIN3AQ8TCU5 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GRIN3AQ8TCU5 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GRIN3AQ8TCU5 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GRIN3AQ8TCU5 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GRIN3AQ8TCU5 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GRIN3AQ8TCU5 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GRIN3AQ8TCU5 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GRIN3AQ8TCU5 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
GRIN3AQ8TCU5 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GRIN3AQ8TCU5 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GRIN3AQ8TCU5 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
GRIN3AQ8TCU5 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GRIN3AQ8TCU5 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GRIN3AQ8TCU5 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
GRIN3AQ8TCU5 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
GRIN3AQ8TCU5 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
GRIN3AQ8TCU5 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.3■□□□□ 0.04
GRIN3AQ8TCU5 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.3■□□□□ 0.04
GRIN3AQ8TCU5 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms