Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 AC245100.3-201ENST00000441281 285 ntBASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 KRT17P7-201ENST00000451704 1104 ntBASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 AC026434.2-201ENST00000506094 1078 ntBASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 SLC25A47P1-201ENST00000531577 414 ntBASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 AC233724.13-201ENST00000598383 410 ntBASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SRFBP1Q8NEF9 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 COX5BP8-201ENST00000416911 349 ntBASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 C2orf27AP3-201ENST00000434123 579 ntBASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 AP001889.1-201ENST00000525414 633 ntBASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 AL354718.3-201ENST00000616414 581 ntBASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 RPSAP52-203ENST00000622976 1023 ntBASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 CR382287.1-201ENST00000623954 586 ntBASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 AC105233.6-201ENST00000642093 218 ntBASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.34□□□□□ -0.11
SRFBP1Q8NEF9 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SRFBP1Q8NEF9 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SRFBP1Q8NEF9 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms