Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 FTLP1-201ENST00000449155 526 ntBASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 SPCS2P2-201ENST00000603270 608 ntBASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 AC138696.2-201ENST00000607376 223 ntBASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 AC090164.2-201ENST00000611487 516 ntBASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 AC009093.2-202ENST00000620513 2079 ntBASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 SHC1P1-201ENST00000425230 1745 ntBASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 INE2-201ENST00000630399 1874 ntBASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
COLGALT1Q8NBJ5 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 EEF1DP6-201ENST00000449232 372 ntBASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 AF254983.2-201ENST00000612331 135 ntBASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 AL136295.7-201ENST00000619226 1200 ntBASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 MIR6727-201ENST00000620702 65 ntBASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 E2F3P2-201ENST00000447755 1422 ntBASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.09■□□□□ 0.17
COLGALT1Q8NBJ5 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
COLGALT1Q8NBJ5 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COLGALT1Q8NBJ5 AC006058.4-201ENST00000624016 1670 ntBASIC16.08■□□□□ 0.17
COLGALT1Q8NBJ5 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
COLGALT1Q8NBJ5 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
COLGALT1Q8NBJ5 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
COLGALT1Q8NBJ5 AL137783.1-201ENST00000623494 1896 ntBASIC16.08■□□□□ 0.17
COLGALT1Q8NBJ5 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
COLGALT1Q8NBJ5 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.08■□□□□ 0.16
COLGALT1Q8NBJ5 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
COLGALT1Q8NBJ5 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.08■□□□□ 0.16
COLGALT1Q8NBJ5 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.08■□□□□ 0.16
COLGALT1Q8NBJ5 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COLGALT1Q8NBJ5 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COLGALT1Q8NBJ5 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COLGALT1Q8NBJ5 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.08■□□□□ 0.16
COLGALT1Q8NBJ5 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.08■□□□□ 0.16
COLGALT1Q8NBJ5 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.08■□□□□ 0.16
COLGALT1Q8NBJ5 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
COLGALT1Q8NBJ5 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.08■□□□□ 0.16
COLGALT1Q8NBJ5 AC125604.1-201ENST00000496255 707 ntBASIC16.08■□□□□ 0.16
COLGALT1Q8NBJ5 PRKXP1-201ENST00000561423 1122 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms