Protein–RNA interactions for Protein: Q8N5Y2

MSL3, Male-specific lethal 3 homolog, humanhuman

Known RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3Q8N5Y2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 FXNP2-201ENST00000411625 547 ntBASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 AC104073.2-201ENST00000453737 312 ntBASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 AC125604.1-201ENST00000496255 707 ntBASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 MIR4783-201ENST00000580343 82 ntBASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 RN7SL574P-201ENST00000581512 297 ntBASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.02■□□□□ 0.32
MSL3Q8N5Y2 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.02■□□□□ 0.31
MSL3Q8N5Y2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
MSL3Q8N5Y2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MSL3Q8N5Y2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MSL3Q8N5Y2 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MSL3Q8N5Y2 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
MSL3Q8N5Y2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
MSL3Q8N5Y2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MSL3Q8N5Y2 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
MSL3Q8N5Y2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
MSL3Q8N5Y2 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 AC092127.1-201ENST00000567093 3455 ntBASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 AC012508.2-201ENST00000567613 1472 ntBASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 AC007274.2-201ENST00000421675 662 ntBASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 AC134698.3-201ENST00000523880 214 ntBASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 FGFR3P5-201ENST00000564496 886 ntBASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 MIR3907-201ENST00000579424 151 ntBASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 AC090164.2-201ENST00000611487 516 ntBASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 AC079336.7-201ENST00000623428 1078 ntBASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 ARHGAP23P1-201ENST00000562773 1937 ntBASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MSL3Q8N5Y2 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MSL3Q8N5Y2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MSL3Q8N5Y2 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MSL3Q8N5Y2 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC17■□□□□ 0.31
MSL3Q8N5Y2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17■□□□□ 0.31
MSL3Q8N5Y2 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MSL3Q8N5Y2 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MSL3Q8N5Y2 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MSL3Q8N5Y2 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MSL3Q8N5Y2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MSL3Q8N5Y2 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17■□□□□ 0.31
MSL3Q8N5Y2 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MSL3Q8N5Y2 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17■□□□□ 0.31
MSL3Q8N5Y2 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms